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Identifying stably expressed genes from multiple RNA-Seq data sets

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Table 1 Summary statistics for the three groups of Arabidopsis samples.
Figure 1 The numbers and overlap of the genes in the three groups of Abrabidopsis samples after re- re-moving genes with low mean counts.
Figure 2 Histograms of the mean CPM (see Eq. (9)) for the top 1,000 most stably expressed genes iden- iden-tified from the seedling (A), leaf (B) and multi-tissue (C) groups using the total variance measure σ ˆ 2
Figure 3 Expression profiles of 15 genes—as measured by RNA-Seq CPM—across 91 samples in the multi-tissue group
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