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Differential Gene Expression (DGE) by RNA sequencing analysis and development of software for integrating different DGE methods

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Academic year: 2017

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Figure 1: Number of mapped reads from genes. (A) Number of mapped genes  by software: Red is 'unspliced aligners' and green is 'spliced aligners'
Figure  2:  Number  of  differential  expressed  reads  (A)  and  mapped  genes  with  EDASeq  corrections  (B)  by  pairwise  conditions
Table 2. Proportions of up/down-regulated DE genes found by TC normalization
Figure  3.  RNA-seq  simulations  performed  by  TCC  package  between  the  uncorrected and corrected data set by EDASeq (CG content and gene length)
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