Bioinformatics Analysis of the Effects of Tobacco Smoke on Gene Expression.

Figure 1a illustrates the results of the interface assignment for the yeast actin protein, ACT1, and Figure 1b shows the PPI network with interfaces overlaid for the subset of

In this work, we present an updated version of the TR network of Mycobacterium tuberculosis ( M.tb ), which incorporates newly characterized transcriptional regulations coming from

The present study investigated the effects of fetal programming, determined by gestational protein restric- tion, on gene expression and activity of the intestinal enzymes sucrose

The EgoNet algorithm comprises four steps: constructing background protein-protein interaction (PPI) network (PPIN) based on gene expression data and PPI data; extracting

We performed a larger scale interaction analysis between all pairs of SNPs that (i) are found in interacting genes according to a curated human protein-protein interaction network ( ,

Furthermore, functional annotation, gene ontology enrichment, pathway enrichment and interaction network analyses were conducted on the differentially expressed genes (DEGs)

Gene ontology (GO) enrichment of differentially expressed genes revealed protein folding, cell morphogenesis and cellular component morphogenesis as the top three functional terms

By integrating gene expression signatures and somatic mutation data on a protein- protein interaction network, we show that the CRC recurrence phenotype involves the dysregulation