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Structure_threader: An improved method for automation and parallelization of programs structure, fastStructure and MavericK on multicore CPU systems

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Academic year: 2021

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Table 1: Characteristics of the systems where the programs were benchmarked, along with the run  time of the single threaded run.
Figure 1: Threading strategy used in Structure_threader. Values in ellipses are read from the  command line and passed to the main process, which generates a job queue
Figure 2: Plots of the  STRUCTURE  “speed up” as more threads are used in Structure_threader,  ParallelStructure and StrAuto
Figure 3: Plots of  FAST S TRUCTURE  and MavericK “speed up” as more threads are used when wrapped  under Structure_threader.

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