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The utility of shallow RNA-Seq for documenting differential gene expression in genes with high and low levels of expression.

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Academic year: 2017

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Figure 1.  Number of differentially expressed genes found with  increasing  sequencing  depth  in  comparisons  of  (A) the sting gland between nurses and foragers, and (B) the whole  digestive  tract  between  nurses  and  foragers
Figure 3 elaborates on the results of Figures 1 and 2. Here we show that as sequencing depth increases, the magnitude of the differences between DEGs decreases [18]
Table 2. Number of key sting gland genes (out of 11) found with shallow RNA-Seq.
Figure  7.    Number  of  differentially  expressed transcription  factors  found  with  increasing  sequencing depth  in  the  developmental  phase  comparisons  between nurses and foragers

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