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Quantitative predictions of peptide binding to any HLA-DR molecule of known sequence: NetMHCIIpan.

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Academic year: 2017

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Table 1. Leave-One-Molecule-Out Benchmark Results in Terms of the AUC and Pearson’s Correlation Values.
Figure 3. Cross-Validation Benchmark Evaluation. The predictive performance of the pan-specific, SMM-align, and TEPITOPE methods compared in terms of the Pearson’s correlation and AUC values averaged over the 11 alleles covered by the TEPITOPE method, resp
Figure 4. Prediction of Endogenously Presented Peptides. The benchmark data set consists of 584 HLA-DR restricted ligands covering 28 HLA-DR alleles downloaded from the SYFPEITHI database as described in the text
Table 3. Identification of Peptide Binding Cores.
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