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Exploring PHD fingers and H3K4me0 interactions with molecular dynamics simulations and binding free energy calculations: AIRE-PHD1, a comparative study.

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Academic year: 2017

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Table 1. MM/PBSA binding free energies (kJ/mol) of wild-type and mutant AIRE-PHD1/H3K4me0 complexes.
Table 2. MM/PBSA binding free energies (kJ/mol) for PHD finger/H3K4me0 complexes.
Figure 4. MM/PBSA calculations of PHD fingers recognizing H3K4me0. (A) Correlation between the experimental binding free energy (DG exp ) and the calculated binding free energy (DDG comp ) of H3K4me0-binding PHD fingers

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