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ISSN: 1676-546X semina.agrarias@uel.br

Universidade Estadual de Londrina Brasil

Ferreira, Jorge Luís; Souza de Assis, Alliny; Brito Lopes, Fernando; Wayne Murphy, Thomas; Corrêa da Silva, Marcelo; Soares Garcia, José Américo; Marques, Ednira Gleida

Reaction norms in weights at 365 days old in nellore bulls in northern Brazil Semina: Ciências Agrárias, vol. 36, núm. 2, 2015, pp. 4613-4625

Universidade Estadual de Londrina Londrina, Brasil

Available in: http://www.redalyc.org/articulo.oa?id=445744167045

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Recebido para publicação 13/07/15 Aprovado em 22/06/15

Reaction norms in weights at 365 days old in nellore bulls in

northern Brazil

Norma de reação para pesos aos 365 dias de idade em bovinos

Nelore do Brasil

Jorge Luís Ferreira

1*

; Alliny Souza de Assis

2

; Fernando Brito Lopes

3

;

Thomas Wayne Murphy

4

; Marcelo Corrêa da Silva

5

; José Américo Soares Garcia

6

;

Ednira Gleida Marques

7

Abstract

Genotype by environment interaction (GxE) studies are of particular interest in Brazil because of the regional diversity of environmental effects and the wide variety of management systems. The present study evaluates GxE effects on 365 d weight (365W) of Nellore cattle raised on pasture in northern Brazil. The analysis utilized random regression techniques to model the reaction norm. Fixed effects consisted of sex, contemporary group, and the covariate of age of cow at calving. The environmental gradient, de ned by the concatenation of a bull and the state in which the calf was born, was modelled by second order Legendre polynomials. Direct additive genetic and residual effects were t as random. Results showed differences in the magnitude of expression of genotype in proportion to decreasing favorability of the environment. As the environment became more unfavorable, the correlation of breeding value to different environments decreased. The correlations between the intercept and the level slope for 365W feature were of moderate magnitude, predominantly indicating the reclassi cation of sires in different environments. Reaction standard model was coherent from a technical and biological view point and enabled the perception of GxE in the genetic evaluation of Nellore cattle in the states of Maranhão, Pará and Tocantins.

Key words: Animal breeding, growth, random regression

Resumo

No Brasil, estudos de interações genótipo x ambiente tem atraído cada vez mais atenção em programas de melhoramento devido à variedade de sistemas de produção e à diversidade ambiental. Objetivou-se avaliar o efeito da interação genótipo x ambiente sobre o peso ajustado aos 365 dias de idade de bovinos da raça Nelore criados a pasto na região norte do Brasil. As análises foram realizadas utilizando-se regressão aleatória para modelar a norma de reação. Foi considerado como efeitos xos o sexo, os 1 Prof. Dr., Universidade Federal do Tocantins, UFT, Campus de Araguaína, Araguaína,TO, Brasil. E-mail: jorgeuft@gmail.com 2 Médica Veterinária, Discente do Curso de Mestrado do Programa de Pós-Graduação em Ciência Animal, Escola de Veterinária e

Zootecnia, Universidade Federal de Goiás, UFG, Campus Samambaia, Goiânia, GO, Brasil. E-mail: linyasa@hotmail.com

3 Post-Doctoral, Department of Animal Sciences, University of Wisconsin, Madison, Wisconsin, USA. E-mail: camult@gmail.com 4 Ph.D., Department of Animal Sciences, University of Wisconsin, Madison, Wisconsin, USA. E-mail: twmurph88@gmail.com 5 Médico Veterinário, Discente do Curso de Doutorado do Programa de Pós-Graduação em Ciência Animal, Escola de Veterinária

e Zootecnia, UFG, Campus Samambaia, Goiânia, GO, Brasil. E-mail: marcelo-correadasilva@hotmail.com

6 Prof. Associado I, Faculdade de Agronomia e Veterinária, Campus Darcy Ribeiro, Universidade de Brasília, UNB, Brasília, DF,

Brasil. E-mail: jasgarcia@unb.br

7 Zootecnista, M.e, Associação Brasileira de Criadores de Zebu, ABCZ, Uberaba, MG, Brasil. E-mail: gleidamarques@hotmail.com * Author for correspondence

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grupos de contemporâneos e como covariável a idade da vaca ao parto. A gradiente ambiental, foi de nida pela concatenação entre o touro e a respectiva unidade federativa de nascimento do animal e modelada por meio de polinômios de Legendre de segunda ordem. Como efeito aleatório, foram considerados os efeitos genéticos aditivos diretos e residuais. Os resultados demonstraram diferenças na magnitude da expressão de seu genótipo à proporção que o ambiente tornava-se desfavorável. Ou seja, à proporção que o ambiente torna-se desfavorável, menores seriam as correlações dos valores genéticos nos diferentes ambientes. As correlações entre o intercepto e o nível de inclinação da reta para a característica P365 foram de magnitude moderada, indicando predominantemente reclassi cação dos valores genéticos dos animais nos diferentes ambientes. O modelo de norma de reação foi coerente do ponto técnico e biológico de visualizar na avaliação genética da população Nelore criada nos Estados do Maranhão, Pará e Tocantins, a interação genótipo ambiente.

Palavras-chave: Crescimento, melhoramento genético animal, regressão aleatória

Introduction

Brazil is a large country that has many different production systems for beef cattle. Most of these differences are due to availability of natural resources in its different regions, edaphoclimatic conditions, and economic differences. This diversity provides different opportunities of genotypic expression for animals of the same sire, which makes the identi cation and proliferation of superior animals all the more dif cult (LOPES et al., 2008, 2012). In this sense, one of the main goals of livestock improvement seems to be the production of animals with economically consistent performance in speci c management and environmental settings (CAMPÊLO et al., 2001). The magnitude of genetic gain in traits of economic importance is dependent upon the accuracy of production records, reliable estimates of genetic and phenotypic parameters, and the breeding objective for a particular production system (DUBEUF; BOYAZOGLU, 2009). New methodologies that aim to more accurately identify genetically superior animals continue to be developed in the eld of animal breeding.

Random regression models have been increasingly used in recent years (BOLIGON et al., 2009, 2011; MACEDO et al., 2009). They enable animal breeders to study longitudinal traits, that is, traits that are measured several times throughout an animal’s lifetime. Another application of random regression is in the analysis of longitudinal data on the environmental range, by using reaction norm

models. Reaction norm models have been applied in studies characterizing the interaction between genotype and environment (GxE).

GxE is a highly controversial issue among cattle breeders and genetic improvement programs. One of the most important applications of genetic evaluation is to rank animals according to their offspring performance in an environment. However, one animal that is a superior parent for all environmental situations may not exist (SANTANA JÚNIOR et al., 2014). GxE has triggered several studies in beef cattle breeding in countries across the world, including Brazil (BERTRAND et al., 1987; KOLMODIN et al., 2004; SANTANA JÚNIOR et al., 2014).

Interactions between genotype and environment occur when the difference between the performance of two or more genotypes is not equal across environments (KOLMODIN et al., 2002). Several approaches exist to analyze and detect GxE, reaction norm models are one of the most extensively used methods. They allow the visualization of an animal’s performance in different environmental and management conditions, thus de ning environmental sensitivity (VIA; LANDE, 1984; KIRKPATRICK; HECKMAN, 1990).

Reaction norms indicate where GxE occurs within the supplied range of environments and its magnitude. A reaction norm may be obtained by random regression of environmental descriptors (KOLMODIN et al., 2002; FIKSE et al., 2003). The environmental variable is unknown and de ned as

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the mean phenotypic performance of animals in each environment. The reaction norm (JONG; BIJMA, 2002; KOLMODIN et al., 2002) is then de ned as a set of phenotypes produced by the genotype of the selection candidate when exposed to varying environments and management conditions.

Reports on the application of reaction norms from animal breeders have become more frequent in recent years. It has been reported that GxE should be detected with greater precision when the correlation among the environmental sources of variation is used (FIKSE et al., 2003; KOLMODIN et al., 2004). An animal’s phenotype is the result of not only genetic and environmental factors but also an often unaccounted for GxE. Therefore, research concerning this latter effect is important to enable breeders to be more con dent in their selection of herd sires and replacement animals. The objective of this study was to quantify the genotype by environment interaction for 365 d weight in pasture-raised Nellore cattle by employing reaction norms in random regression models.

Materials and Methods

The analyses of environmental effects included climatic variables from a total of 498 Brazilian municipalities, namely, 217 from Maranhão, 143 from and 138 from Tocantins. The daily average of climatic variables included: maximum temperature (MAX), minimum temperature (MIN), mean temperature (TEMP), precipitation (PR), vegetal covering estimated by normalized index of vegetation difference (NIVD), relative humidity (RH), altitude (ALT), and temperature and humidity index (THI). All variables were retrieved from databases of the Instituto Brasileiro de Geogra a e Estatística, Instituto Nacional de Meteorologia, Instituto Nacional de Pesquisas Espaciais, and the United States Geological Survey. Climatic variables were then standardized by the STANDARD procedure of Statistical Analysis System using a mean of zero and a variance of one (SAS, 2002). Table 1 provides statistics for TEMP, PR, ALT, NIVD, RH, and THI for the three states.

Table 1. Mean, standard deviation and coef cient of variation for mean temperature (TEMP), precipitation (PR), altitude (ALT), vegetation index per normalized difference (NIVD), relative humidity (RH) and temperature and humidity index (THI) of the municipalities of Maranhão, Pará, and Tocantins.

State Variable Mean DP CV Minimum Maximum

Maranhão TEMP 32.40 0.83 2.56 31.00 33.99 PR 1796.40 336.25 18.72 1027.83 2571.01 ALT 246.82 71.80 29.09 84.83 451.98 NIVD 0.40 0.01 1.44 0.38 0.42 RH 50.03 9.78 19.55 21.81 82.64 THI 81.28 2.14 2.63 76.84 87.55 Pará TEMP 33.95 1.13 3.34 32.00 36.00 PR 2200.11 93.77 4.26 1963.07 2420.05 ALT 730.43 147.43 20.18 359.31 1140.62 NIVD 0.81 0.01 1.27 0.79 0.84 RH 69.56 10.19 14.64 45.25 98.91 THI 87.13 2.66 3.06 81.15 94.65 Tocantins TEMP 31.92 1.21 3.78 30.14 33.99 PR 1091.02 100.04 9.17 830.40 1382.69 ALT 300.86 64.18 21.33 139.09 440.51 NIVD 0.41 0.01 2.54 0.38 0.44 RH 55.03 4.82 8.75 37.86 67.50 THI 81.53 1.90 2.33 77.05 86.17

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Phenotypic data was provided by the Associação Brasileira de Criadores de Zebu which included body weight adjusted to 365 d (365W) from animals born between 1988 and 2008. The nal dataset consisted of 8,741 records from animals sired by the 71 bulls that had offspring in all three of the states analyzed. The nal pedigree consisted of 14,837 animals. The connectivity between contemporary groups (CGs) was analyzed with AMC (ROSO; SCHENKEL, 2006) which uses a method based on the total number of genetic links. Records from CGs with less than 10 genetic links, CGs with less than four animals, and bulls with less than three offspring were removed. Analyses of variance was conducted to determine if mean 365W was different between the three states by using a general linear model (PROC GLM, SAS) that employed Tukey’s studentized range test.

Analyses to evaluate the effect of GxE were done in two stages. The rst stage consisted of a univariate animal model in which CG, sex of calf, age of cow at calving (ACC), and environmental range (ER) were included as xed effects. CGs contained information on herd (n = 8), year (n =

21), and season of birth (n = 3; Season 1: January through April, Season 2: May through August, or Season 3: September through December). ACC was t as a co-variable with linear and quadratic terms. ER was de ned as the concatenation between the sire identifcation and the state in which the calf was born. The univariate animal model is de ned below:

y = Xb +Za + e (1)

where y is the vector of 365W observations, b is the vector of xed effects (CG, ACC, and ER), a is the vector of random additive genetic effects, X is a incidence matrix relating y to b, Z is a incidence matrix relating y to a, and e is a vector of random residual effects.

The second stage to evaluate GxE was employed to recalculate ER as absolute rates by standardizing them with a mean of zero and standard deviation of one using PROC STANDARD. Random regression analyses were undertaken with the same CG and ACC as xed effects and the standardized ER as a covariable. Additive genetic effects were considered random. A second order Legendre polynomial was included to model the effect of ER, shown in the model below: (2)

( )

( )

1

1 0 0 b k = m A k = m jm m ij ij i m m ij = EF+ b t + α t +e y

φ

φ

where, yijis the ith weight observation of the jth animal, EF is a set of xed effects, bm is a xed regression coef cient to model mean trajectory of the population, ϕm(ti) is a function of Legendre

polynomials that describes the mean trajectory of the population according to the environmental range;, ϕm(tij) is a function of Legendre polynomials

describing growth curves of each animal j according to environmental range ti for random additive genetic effects, αjm are random regression coef cients of additive genetic effects, kband kA are the order of the respective Legendre polynomials included in the model, and eij is the random error associated to the

ithenvironmental range of the jth animal.

The variance components and solutions of the models used in the rst and second stages were estimated by restricted maximum likelihood in WOMBAT (MEYER, 2007). In the random regression model, heterogenous residual variance was assumed with three classes.

Results and Discussion

The average THI, which indicates thermal comfort, were 81.28 ± 2.14, 87.13 ± 2.66 and 81.53 ± 1.90 for Maranhão, Pará, and Tocantins, respectively. THI is a linear combination of air temperature and relative humidity, both of which

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averaged 32.4 ± 0.83ºC and 50.0 ± 9.78g/m3, 33.95

± 1.13ºC and 69.56 ± 10.1978g/m3, and 31.92 ±

1.21ºC and 55.03 ± 4.8378g/m3 for Maranhão,

Pará, and Tocantins, respectively. The average precipitation was 1796.4 ± 336.25mm, 2200 ± 93.77mm, and 1091.04 ± 100.04mm for Maranhão, Pará, and Tocantins, respectively. These climatic variables characterize the conditions animals must cope with in order to remain healthy and productive in the Amazon region of Brazil. An optimal THI for cattle production has been estimated at or below 70 (SILVA, 2000). Although a THI above 70 may not cause any animal health problems, cattle breeders may experience slight decreases rate of gain.

According to Martins (2001), the solar energy load on an animal in tropical regions may be as much as three times the total endogenous heat produced by the animal. Absorption of solar radiation by coupled with increases in environmental temperature can considerably in uence the production of metabolic heat (ENCARNAÇÃO, 1989). The detrimental effects of solar radiation on animal production may be eased by natural or provided shading. These results may indicate that the environment may have a greater in uence on the production of grazing cattle in the states of Maranhão and Tocantins. The majority of the municipalities in these states have average THI above 70. Maranhão and Tocantins are further characterized by high mean temperatures and low precipitation in the timeline studied.

Since animals in these regions are extensively managed on pasture, forage availability is an important factor for beef production and can be quanti ed by the vegetation index. According to the

Division of Satellite and Environmental Systems (2011), NIVD is a variable that maps and measures vegetation and growing conditions within a determined area. Ponzoni and Shimabukuro (2007) reported that an NIVD of 0.80 was associated with dense vegetation (SILVA et al., 2007). Analysis of NIVD may be employed in studies considering the vegetation growth cycle. The average NIVD was 0.40 ± 0.01, 0.81 ± 0.01, and 0.41 ± 0.01 for the states of Maranhão, Pará and Tocantins, respectively. Although the state of Pará had the highest average THI of the states analyzed, it also had the highest average precipitation and the greatest vegetation cover which may indicate better natural shading and forage availability. These conditions are conducive to thermal comfort for animals and lends to increases in their growth and production. In combination, these favorable conditions may partially explain the higher mean performance in 365W for animals raised in Pará (Table 2). THI and NIVD are highly relevant to analyze the spatial distribution of thermal comfort and the availability of forage in the states under analysis.

The differences of these environmental variables between these states may reveal the possibility of differing environmental effects on the phenotype of the animals raised in different environments. Olesen et al. (2000) showed that the ef cient use of genetic resources and their stability in several environments are important factors for successful animal breeding programs. Along with this, McManus et al. (2011) suggested that management and environmental effects should be properly accounted for if in order for a selection program to show genetic gains.

Table 2. Mean (kg), standard deviation (kg) and coef cient of variation (%) for 365 day weight in Nellore cattle according to state state.

State Mean Standard deviation Coef cient of variation

Maranhão 242.81B 43.78 18.03

Pará 256.96A 46.42 18.07

Tocantins 226.01C 39.13 17.31

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The solutions for the ERs from the univariate animal model varied between -97.19 kg and 81.09 kg, and 80% of the solutions ranged between -49.97 kg (10% percentile) and 46.22 kg (90% percentile). These results demonstrate the importance of environmental variables between states and how they may affect animal performance. Besides accounting for local conditions in selection programs, animal performance may be affected by a genotype by environment interaction which can create environmental sensitivity (BLACKBURN et al., 1998; OLESEN et al., 2000; PEGOLO, 2005;

McMANUS et al., 2011).

Sensitivity of an animal to the environment is an important aspect that is assesed by reaction norms. The variability of the animal genetic component was tested across environmental situations that took into account different ERs which varied between -21 kg and +21 kg (Table 3). Results revealed differences in the magnitude of genotypic expression as the environment became more and more unfavorable. In other words, as the environment became unfavorable, the correlation of breeding value in the different environments became smaller.

Table 3. Estimates of linear correlation between expected progeny difference of bulls evaluated in Maranhão, Pará and Tocantins within different environmental ranges.

-14 -7 0 7 14 21 -21 0.67 0.53 0.31 0.07 -0.20 -0.41 *** *** ** Ns * ** -14 0.98 0.87 0.67 0.35 -0.02 *** *** *** ** Ns -7 0.94 0.78 0.48 0.11 *** *** *** Ns 0 0.93 0.71 0.38 *** *** ** 7 0.90 0.65 *** *** 14 0.90 ***

* (P < 0.05), * (P < 0.01), *** (P < 0 .001), ns (not signi cant, P > 0.05), Spearman’s correlation

Lower and inversely proportional estimates were obtained between favorable and unfavorable extremes (-0.20 and -0.41) when genetic correlation between environmental ranges for 365W are taken into account (Figure 1). The genetic correlation of intermediate environments with favorable and unfavorable environments

(+7 and -7) was basically similar (0.94). In their studies on reaction norms for growth characteristics of beef cattle, Corrêa et al. (2009) and Ribeiro et al. (2009) also reported variations in genetic correlation between environments and suggested a re-classi cation of animals according to the environmental level.

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Figure 1. Estimates of the genetic correlation for 365W among the different environmental ranges.

Without properly accounting for these effects in genetic evaluation programs, selection for more sensitive genotypes may occur which may result in an increase of phenotypic plasticity of in their progeny. This may not be noticeable in favorable environments; however, these genotypes may not perform well in unfavorable environments. Thus, the use of reaction norm may actually provide a greater response to the selection, especially in environments with the best management.

The additive genetic variance for 365W varied with ER, increasing as the environment improved. This provided a scale effect for GxE (Figure 2). Variation in additive genetic variance through environmental ranges agreed with results reported by several authors who report an increase in variance in proportion to the environmental range becoming favorable (KOLMODIN et al., 2002; CARDOSO et al., 2004, 2011; SU et al., 2006).

The heterogeneity of variances should be considered since greater additive genetic variance

and heritability were estimated as the environment became more favorable. Since the heritability trend is due to the proportion of additive genetic to phenotypic variance, a greater response to selection may be expected for a change in environmental sensitivity. The magnitude of the variance component of the linear regression coef cient is key to evaluate the interaction because the GxE presupposes differences among these animals. Thus, the correlation between the intercept and the slope (0.49, P < 0.0001) showed that the reclassi cation of animals occurred with variation in environmental range.

High correlations mean the heterogeneity of animal sensitiveness, in other words, it means reaction norms with different slopes for each animal. Similar situations may result in modi cations in genetic variance or even modi cations in the order of classi cation of the animals in different environments. On the other hand, low rates presuppose parallel trend of reaction norms along to the environmental axes, with no change in

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additive genetic variance neither classi cation of the animals along to the ER, and there is no need in

such situation to seek the best genotypes in different environments.

Figure 2. Reaction norm of estimates of additive genetic variance (kg²) and heritability (h²) and their respective standard deviations for 365W of Nellore cattle.

The correlation between the intercept and slope for 365W were slightly high, which is indicative of the reclassi cation of the animals in different environments. Therefore, the best animals in a given environment are not necessarily the best in another environment. Santana Júnior et al. (2014) provided similar reasoning for the correlation between the intercept and the slope when studying calf weaning weight (0.40) in Brazil.

It was shown that heritability increases when conditions in the environment improve (Figure

2). Therefore, greater responses to selection may be expected in favorable and intermediate environments. Mattar et al. (2011), studying body weight at 420 days in Canchim cattle (5/8 Charolais, 3/8 Zebu) and Cardoso and Tempelman (2012) analyzing post-weaning weight in Brazilian Angus cattle both reported a similar trend when working with reaction norms.

Table 4 displays offspring averages of the ve best bulls in each state and do not characterize the trajectory of their mean EPDs according to the

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environment range. The spatialization of the bulls’ EPDs is shown according to the environmental range within each state (Figure 3). The concave

shape of trends denotes environmental sensitivity of each animal in front of possible environmental changes.

Table 4. Classi cation (mean EPD for W365 in kg) of the ve best bulls in each state, compared to those in the other states under analysis.

Pará Tocantins Maranhão

Pará 1st (7.63) 1st (16.77) 2nd (6.48) 2nd (5.53) 2nd (8.12) 1st (8.42) 3rd (4.69) 3rd (6.13) 5th (4.82) 4th (4.42) 5th (5.18) 7th (3.77) 5th (4.08) 28th (0.36) 29th (-0.08) Tocantins 1st (7.63) 1st (16.77) 2nd (6.48) 2nd (5.53) 2nd (8.12) 1st (8.42) 3rd (4.69) 3rd (6.13) 5th (4.82) 7th (3.98) 4th (5.27) 8th (3.46) 4th (4.42) 5th (5.18) 7th (3.77) Maranhão 2nd (5.53) 2nd (8.12) 1st (8.42) 1st (7.63) 1st (16.77) 2nd (6.48) 9th (3.84) 7th (4.86) 3rd (5.81) 34th (-1.21) 35th (-0.83) 4th (5.72) 3rd (4.69) 3rd (6.13) 5th (4.82)

Slopes demonstrate the effect of the reaction norm for the same animal in different environments since the coef cient of linear regression represents the magnitude of the slope of the reaction norm. Therefore, greater slopes correspond to greater environmental sensitivity and genetic change in the classi cation of bulls is obtained according to changes in the environmental range. The reaction norm model with linear random regression presupposes that reaction norms are linear. In other words, the animals respond linearly to a continuous environmental range.

According to Valente (2007), two random coef cients of regression (intercept and linear) are attributed to each animal. They are used to predict the breeding value for all animals in every environment. Higher rates of linear regression coef cients mean higher sensitivity of animals to environmental change. Lira (2014) analyzed GxE by reaction

norm in Nellore cattle in the Brazilian tropics and also reported a scale effect through environmental ranges, with an increase of breeding value in bulls when improvement in the environment occurred.

It should be noted that the three best bulls in Pará and Tocantins were the same,though their 365W EPDs were different. However, the magnitudes of their EPDs were different between these states. The 1st, 2nd and 3rd best bulls in the state of Pará had

average progeny 365W EPDs of 7.63 kg, 5.53 kg and 4.69 kg, respectively, whereas their average progeny EPDs in the state of Tocantins were 16.77kg, 8.12kg and 6.13kg, respectively.

Maranhão had the greatest difference in the classi cation of its top ve bulls, with no similarities with the other states (Table 4). These results demonstrate the differences of the same genotype for different environments and thus the importance

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of accounting for a genotype by environment interaction in genetic evaluation programs. This is

especially true in Brazil due to its highly differentiated environments and management settings.

Figure 3. Reaction norm of expected progeny difference (EPD) of the ve best bulls (1, 2, 3, 4 and 5) for 365W of Nellore cattle in Pará, Maranhão and Tocantins.

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Conclusion

The reaction norm model was effective at detecting GxE due to a high variability of estimated breeding values in extreme environments. This model has the advantage of estimating breeding values for each environment because it estimates genetic parameters for each environment. The reaction norm model was able to visualize GxE in a Nellore population in that consisted of genetically related animals in the states of Maranhão, Pará and Tocantins. Selection response varies according to the environment and the genetic trends of each animal indicate that the population is reaching a greater plasticity. This should give great concern to breeders since a greater plasticity seems to limit heritability and selection responses.

Acknowledgements

The authors are grateful to the Federal University of Tocantins (Financial support process Propesq/ UFT nº 21/2014), the Brazilian Association of Zebu Breeders, the Brazilian Institute of Geography and Statistics, the National Institute of Meteorology, the National Institute for Space Research and the United States Geological Survey for the phenotypic and environmental datasets provided for this study.

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