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[PDF] Top 20 Comprehensive transcriptome assembly of Chickpea (Cicer arietinum L.) using sanger and next generation sequencing platforms: development and applications.

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Comprehensive transcriptome assembly of Chickpea (Cicer arietinum L.) using sanger and next generation sequencing platforms: development and applications.

Comprehensive transcriptome assembly of Chickpea (Cicer arietinum L.) using sanger and next generation sequencing platforms: development and applications.

... A comprehensive transcriptome assembly of chickpea has been developed using ...reads and 139,214 Sanger expressed sequence tags (ESTs) from ...hybrid ... See full document

12

Application of Next-generation Sequencing in Clinical Molecular Diagnostics

Application of Next-generation Sequencing in Clinical Molecular Diagnostics

... 2004. Using this platform, the second complete genome of an individual (James ...length and accuracy to 700 bp and ...output of 0.7 Gb of data per run within 24 ...length ... See full document

15

Next-generation sequencing-based transcriptome analysis of Helicoverpa armigera Larvae immune-primed with Photorhabdus luminescens TT01.

Next-generation sequencing-based transcriptome analysis of Helicoverpa armigera Larvae immune-primed with Photorhabdus luminescens TT01.

... the development of next-generation sequencing (NGS), also called high-throughput or deep sequencing technology has provided a powerful, highly reproducible and ... See full document

13

Comparative analysis of kabuli chickpea transcriptome with desi and wild chickpea provides a rich resource for development of functional markers.

Comparative analysis of kabuli chickpea transcriptome with desi and wild chickpea provides a rich resource for development of functional markers.

... complexity of these chickpea ...desi and kabuli chickpea despite clear phenotypic differences in them ...frequency of tri-nucleotide SSRs in chickpea transcripts consistent with ... See full document

14

Detection and removal of biases in the analysis of next-generation sequencing reads.

Detection and removal of biases in the analysis of next-generation sequencing reads.

... isolated and subjected to next-generation ...Examination of nucleotide biases within reads across different datasets of deep-sequencing ...logos of the first twenty ... See full document

12

Situation and development of worldwide agri-environment: Agricultural land uses, fertilizers consumption and carbon dioxide equivalent emissions

Situation and development of worldwide agri-environment: Agricultural land uses, fertilizers consumption and carbon dioxide equivalent emissions

... fertilizers and pesticides uses, etc. Expansion of agricultural land expansion is one of the most significant human alterations to the global environment (Zhang, ...rate of 1.66% (Grigg, 1993; ... See full document

8

High-resolution analysis of the 5'-end transcriptome using a next generation DNA sequencer.

High-resolution analysis of the 5'-end transcriptome using a next generation DNA sequencer.

... 9-end sequencing of mRNAs isolated from human colon adenocarcinoma HT-29 cells treated the epigenetic agent, 5Aza, a potent inhibitor of DNA ...methylation. Using the SOLiD platform, we ... See full document

10

Development and characterization of novel microsatellite markers by Next Generation Sequencing for the blue and red shrimp Aristeus antennatus

Development and characterization of novel microsatellite markers by Next Generation Sequencing for the blue and red shrimp Aristeus antennatus

... blue and red shrimp, Aristeus antennatus, is a commercially important crustacean, in the Mediterranean Sea, which has been listed as a priority species for fishery ...from next-generation ... See full document

14

Next Generation Semiconductor Based Sequencing of the Donkey (Equus asinus) Genome Provided Comparative Sequence Data against the Horse Genome and a Few Millions of Single Nucleotide Polymorphisms.

Next Generation Semiconductor Based Sequencing of the Donkey (Equus asinus) Genome Provided Comparative Sequence Data against the Horse Genome and a Few Millions of Single Nucleotide Polymorphisms.

... each of the sequenced and aligned dataset described above the combination of the mpileup and bcftools functions of Samtools [50] was used for calling variants (SNPs) without any pre- ... See full document

18

Identification and characterization of microRNAs in normal equine tissues by Next Generation Sequencing.

Identification and characterization of microRNAs in normal equine tissues by Next Generation Sequencing.

... role of microRNAs (miRNAs) as a post-transcriptional gene regulator has been elucidated in a broad range of organisms including domestic ...Characterization of miRNAs in normal tissues is an ... See full document

10

Research advances in theories and methods of community assembly and succession

Research advances in theories and methods of community assembly and succession

... orderly and predictable changes following a disturbance or initial colonization of new habitat (Connell and Slatyer, ...process of change in the species structure of an ecological ... See full document

9

Caracterização de amostras de mel por next generation sequencing

Caracterização de amostras de mel por next generation sequencing

... O presente trabalho teve como objetivo caracterizar 41 amostras de mel usando uma técnica de Next-Generation Sequencing (NGS). A aplicação da técnica de NGS a estas amostras permitiu identificar, ao ... See full document

53

Development of a new pharmacogenomics system for lung cancer based in next generation sequencing

Development of a new pharmacogenomics system for lung cancer based in next generation sequencing

... Another thanks goes to the people sharing the office with me. Sorry for the unfunny jokes about me never getting this dissertation done and for always giving me condescending looks whenever I’d postpone its ... See full document

14

Hereditary cancer risk assessment: insights and perspectives for the Next-Generation Sequencing era

Hereditary cancer risk assessment: insights and perspectives for the Next-Generation Sequencing era

... those of the general ...range of susceptibilities in the ...(Houlston and Peto, 2004). Most of these alleles have an intergenic localization and many neighbor tumor suppressor genes ... See full document

5

Full transcriptome analysis of early dorsoventral patterning in zebrafish.

Full transcriptome analysis of early dorsoventral patterning in zebrafish.

... patterns of newly characterized ...away, and becomes detectable only during somitogenesis in a stripe in the hindbrain area, and in the ...MBT, and it is expressed at higher levels in a few ... See full document

13

DNA qualification workflow for next generation sequencing of histopathological samples.

DNA qualification workflow for next generation sequencing of histopathological samples.

... those of Qubit and its consistency with dsDNA quantification by qPCR was limited to high molecular weight DNA extracted from FF samples and cell lines, where total DNA and dsDNA virtually ... See full document

8

Classification Of Complex UCI Datasets Using Machine Learning And Evolutionary Algorithms

Classification Of Complex UCI Datasets Using Machine Learning And Evolutionary Algorithms

... one of the most researched questions in machine learning and data ...range of real problems have been stated as Classification Problems, for example credit scoring, bankruptcy prediction, medical ... See full document

10

WP 105 Family Planning and Development: Aggregate Effects of Contraceptive Use

WP 105 Family Planning and Development: Aggregate Effects of Contraceptive Use

... execute and report on the counterfactual experiment in which the utility cost of abortion is reduced to zero, we know that it would be difficult to implement in ...cost of abortions can also be ... See full document

47

Firms, Informality and Development: Theory and evidence from Brazil

Firms, Informality and Development: Theory and evidence from Brazil

... share of informal workers, and therefore the net effect on labor informality is nearly ...share of informal workers and actually increases informality among ...cost of being formal ... See full document

45

PeSV-Fisher: identification of somatic and non-somatic structural variants using next generation sequencing data.

PeSV-Fisher: identification of somatic and non-somatic structural variants using next generation sequencing data.

... that of BreakDancer and VariationHunter, checking the overlap of our calls with those of these two algorithms obtained from a Supplementary Table of Mills et ... See full document

10

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