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[PDF] Top 20 Genome-wide identification of reverse complementary microRNA genes in plants.

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Genome-wide identification of reverse complementary microRNA genes in plants.

Genome-wide identification of reverse complementary microRNA genes in plants.

... capable of forming hairpin structures were retained for the following sRNA HTS data-based ...structure-based identification of reverse complementary microRNAs (RC- ...counts in ... See full document

11

Genome-Wide Identification of the Invertase Gene Family in Populus.

Genome-Wide Identification of the Invertase Gene Family in Populus.

... role in carbohydrate partitioning and plant development as it cataly- ses the irreversible hydrolysis of sucrose into glucose and ...family in plants is composed of two sub-families: ... See full document

21

Identification of genome-wide variations among three elite restorer lines for hybrid-rice.

Identification of genome-wide variations among three elite restorer lines for hybrid-rice.

... integrity of encoded proteins were also ...elimination of translation initiation sites (ATG change; 11 SNPs), and replace- ment of nonsense with sense codons (stop change; 82 ...SNPs). Of ... See full document

14

Genome-wide identification of microRNAs in response to low nitrate availability in maize leaves and roots.

Genome-wide identification of microRNAs in response to low nitrate availability in maize leaves and roots.

... target genes were identified in maize according to Zhang et al [20], and the results presented in Tables S1 and S2, along with the description of the function of these ...genes. ... See full document

9

Genome-wide identification and expression analysis of NBS-encoding genes in Malus x domestica and expansion of NBS genes family in Rosaceae.

Genome-wide identification and expression analysis of NBS-encoding genes in Malus x domestica and expansion of NBS genes family in Rosaceae.

... one of the most economically important perennial fruit crops of the temperate ...consumptions of apple by humans may reduce the risk of different kind of cancers ...other plants, ... See full document

13

Genome-wide identification of different dormant Medicago sativa L. MicroRNAs in response to fall dormancy.

Genome-wide identification of different dormant Medicago sativa L. MicroRNAs in response to fall dormancy.

... the genome sequence of Medicago truncatula has been completed, which is an annual legume species with a small diploid genome and easy transformation and is a reference model plant to study functional ... See full document

23

Characterization and identification of microRNA core promoters in four model species.

Characterization and identification of microRNA core promoters in four model species.

... a microRNA gene can be transcribed by pol ...One of them is whether all known microRNA genes of different species are class-II ...thaliana microRNA genes have been shown ... See full document

12

Genome-wide linkage analysis of global gene expression in loin muscle tissue identifies candidate genes in pigs.

Genome-wide linkage analysis of global gene expression in loin muscle tissue identifies candidate genes in pigs.

... consisted of choosing the two extreme males and females within each litter for a trait of ...frozen in liquid nitrogen and stored at – 80 uC. Total RNA from 1.0 g of each tissue sample was ... See full document

11

E2F1-Mediated Induction of NFYB Attenuates Apoptosis via Joint Regulation of a Pro-Survival Transcriptional Program.

E2F1-Mediated Induction of NFYB Attenuates Apoptosis via Joint Regulation of a Pro-Survival Transcriptional Program.

... set of genes jointly induced by E2F1 and NFYB demonstrated most significant overexpression in ...intriguing in that the inducible E2F1 system used in this study comes from an ... See full document

16

Identification of regulatory genes implicated in continuous flowering of longan (Dimocarpus longan L.).

Identification of regulatory genes implicated in continuous flowering of longan (Dimocarpus longan L.).

... gene of great interest from this current study is ELF4 (U4309), which was up-regulated nearly 90 times in ‘Sijimi’ compared with ...time in Arabidopsis thaliana ...over-expression of ELF4 ... See full document

24

A genome-wide association study in chronic obstructive pulmonary disease (COPD): identification of two major susceptibility loci.

A genome-wide association study in chronic obstructive pulmonary disease (COPD): identification of two major susceptibility loci.

... results of previous complex disease genetic association studies, we contend that a conservative approach is ...number of significant associations may have been uncovered if more of the most promising ... See full document

8

A genome-wide analysis of FRT-like sequences in the human genome.

A genome-wide analysis of FRT-like sequences in the human genome.

... location in LINE1 (Figure 6A), on average, FRT-like sequences are more rare in repeated genomic DNA than in unique DNA: repetitive DNA constitutes about 50% of the human genome but only ... See full document

11

Development of functional genomic tools in trematodes: RNA interference and luciferase reporter gene activity in Fasciola hepatica.

Development of functional genomic tools in trematodes: RNA interference and luciferase reporter gene activity in Fasciola hepatica.

... availability of sequence information from diverse parasites through genomic and transcriptomic projects offer new opportunities for the identification of key mediators in the parasite–host ... See full document

10

Genome-Wide Analysis of the Expression of WRKY Family Genes in Different Developmental Stages of Wild Strawberry (Fragaria vesca) Fruit.

Genome-Wide Analysis of the Expression of WRKY Family Genes in Different Developmental Stages of Wild Strawberry (Fragaria vesca) Fruit.

... members of the family have been characterized from several plant species, and they have been found to be involved in various physiological processes under normal growth conditions and under various biotic ... See full document

18

Genome-wide analysis of antiviral signature genes in porcine macrophages at different activation statuses.

Genome-wide analysis of antiviral signature genes in porcine macrophages at different activation statuses.

... annotation of DEGs in our RNA-Seq data revealed family-wide differential expression of genes involved in epigenetic regulation, which is defined as non-genetic alterations ... See full document

12

rs1004819 is the main disease-associated IL23R variant in German Crohn's disease patients: combined analysis of IL23R, CARD15, and OCTN1/2 variants.

rs1004819 is the main disease-associated IL23R variant in German Crohn's disease patients: combined analysis of IL23R, CARD15, and OCTN1/2 variants.

... proof of principle for the applicability of genome-wide association studies in the genetics of complex diseases, the contribution of certain IL23R variants to CD or UC is ... See full document

8

Identification of optimal reference genes for gene expression normalization in a wide cohort of endometrioid endometrial carcinoma tissues.

Identification of optimal reference genes for gene expression normalization in a wide cohort of endometrioid endometrial carcinoma tissues.

... reference genes, we analyzed our results under the suggested published rules ...reference genes using geNorm and NormFinder softwares, based on two distinct statistical models and often used in other ... See full document

16

João José de Simoni Gouveia 1,2 , Marcos Vinicius Gualberto Barbosa da Silva

João José de Simoni Gouveia 1,2 , Marcos Vinicius Gualberto Barbosa da Silva

... type of selection, the relative age of the neutral linked alleles, the strength of selection and the recombination rate (Braverman et ...Recognition of the molecular footprints left by ... See full document

13

Identification of methylated genes associated with aggressive clinicopathological features in mantle cell lymphoma.

Identification of methylated genes associated with aggressive clinicopathological features in mantle cell lymphoma.

... place in the same primary MCL. The accumulation of methylated genes was associated with high levels of prolifera- tion, increased number of chromosomal abnormalities, and lower ... See full document

10

Comparative genomics of Mycoplasma: analysis of conserved essential genes and diversity of the pan-genome.

Comparative genomics of Mycoplasma: analysis of conserved essential genes and diversity of the pan-genome.

... [28]. In reality, it is quite different for a cell to survive in a laboratory setting and to thrive in the ...nonessential genes that slow growth without arresting it but can also miss ... See full document

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