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[PDF] Top 20 Genome-Wide Specific Selection in Three Domestic Sheep Breeds.

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Genome-Wide Specific Selection in Three Domestic Sheep Breeds.

Genome-Wide Specific Selection in Three Domestic Sheep Breeds.

... down-regulated in differentiated adiposities compared with intra- muscular fibroblast-like cells ...gene in the regulation of conceptus growth and elongation ...enriched in brilliant cresyl blue ... See full document

21

Identification of genome-wide copy number variations among diverse pig breeds using SNP genotyping arrays.

Identification of genome-wide copy number variations among diverse pig breeds using SNP genotyping arrays.

... susceptibility in domestic animals. In the present study, we performed a genome-wide CNV identification in 14 individuals selected from diverse populations, including six types ... See full document

8

Genome-wide detection of selective signature in Chinese Holstein.

Genome-wide detection of selective signature in Chinese Holstein.

... presented in these regions, it can demonstrate the longer extent of homozygosity of some haplotypes were not simply because of low recombination rates but due to the strong recent ...selection. In a ... See full document

9

Genome-wide analysis of cold adaptation in indigenous Siberian populations.

Genome-wide analysis of cold adaptation in indigenous Siberian populations.

... evolved in warm environments for millions of years, our species has colonised different climate zones of the world, including high latitudes and cold ...habitation in (sub-)Arctic regions has been enabled ... See full document

11

Genome-wide footprints of pig domestication and selection revealed through massive parallel sequencing of pooled DNA.

Genome-wide footprints of pig domestication and selection revealed through massive parallel sequencing of pooled DNA.

... of domestic pig breeds with divergent phenotypes ...changes in social structure, reproduction and adaptation towards humans ...most breeds are created in captivity but, during the ... See full document

12

João José de Simoni Gouveia 1,2 , Marcos Vinicius Gualberto Barbosa da Silva

João José de Simoni Gouveia 1,2 , Marcos Vinicius Gualberto Barbosa da Silva

... other breeds (Kijas et al., 2012). In addition, Clop et ...reduction in the variability of microsatellites sur- rounding this gene upon comparing hyper-muscled Texels with other sheep ... See full document

13

Detection and evaluation of selection signatures in sheep

Detection and evaluation of selection signatures in sheep

... of genome-wide single nucleotide polymorphism (SNP) arrays made it possible to carry out several studies with different ...The selection process can increase or reduce allelic (or genic) frequencies ... See full document

13

Trans-species polymorphism and selection in the MHC class II DRA genes of domestic sheep.

Trans-species polymorphism and selection in the MHC class II DRA genes of domestic sheep.

... present in the ancestral founding population of sheep are the two most likely explanations for the origin of the unusual allelic ...pair. In the absence of the DRA data provided here, cross-species ... See full document

10

Three-dimensional genome architecture influences partner selection for chromosomal translocations in human disease.

Three-dimensional genome architecture influences partner selection for chromosomal translocations in human disease.

... colocalize in the nuclei of normal cells, prior to ...on three-dimensional genome architecture contribute to chromosomal rearrangements in human ...of three-dimensional chromosome ... See full document

9

Common genetic variants are associated with accelerated bone mineral density loss after hematopoietic cell transplantation.

Common genetic variants are associated with accelerated bone mineral density loss after hematopoietic cell transplantation.

... $0.10 in the population of European ancestry; (2) SNPs that have been well studied and established in association with osteoporosis or other bone traits in the general population, including those ... See full document

8

Differential gene expression at the maternal-fetal interface in preeclampsia is influenced by gestational age.

Differential gene expression at the maternal-fetal interface in preeclampsia is influenced by gestational age.

... the three datasets were pooled and analysed using the moderated t-test implemented in limma R library [18,19], available via the bioconductor project ...included in three studies differed ... See full document

13

Genome-wide association study for sperm motility in pigs

Genome-wide association study for sperm motility in pigs

... a Genome Wide Association Analysis is performed, it is important to do the quality control in the genotypic data in order to: 1) eliminate SNPs and animals that had high density of genotyping ... See full document

46

Common variants on chromosome 9p21 are associated with normal tension glaucoma.

Common variants on chromosome 9p21 are associated with normal tension glaucoma.

... and in the intron of CDKN2BAS (also known as ANRIL) on 9p21, with Japanese ...POAG in Caucasian GWASs. In one of those studies, rs4977756 located 60 kbp upstream of CDKN2B, was most significantly ... See full document

8

Identification of epigenetically altered genes in sporadic amyotrophic lateral sclerosis.

Identification of epigenetically altered genes in sporadic amyotrophic lateral sclerosis.

... connected in our co-citation network and their interplay promote activation of various genes including interleukin-6 (IL-6) ...STAT5A in ALS pathogenesis and ...C/EBPB in ALS microglia from spinal ... See full document

15

A genome-wide analysis of FRT-like sequences in the human genome.

A genome-wide analysis of FRT-like sequences in the human genome.

... location in LINE1 (Figure 6A), on average, FRT-like sequences are more rare in repeated genomic DNA than in unique DNA: repetitive DNA constitutes about 50% of the human genome but only about ... See full document

11

A novel nonsense mutation in the DMP1 gene identified by a genome-wide association study is responsible for inherited rickets in Corriedale sheep.

A novel nonsense mutation in the DMP1 gene identified by a genome-wide association study is responsible for inherited rickets in Corriedale sheep.

... change in the DMP1 ...related sheep were either ‘‘C T’’ or ‘‘C C’’; and 46 unrelated control sheep of other breeds were only ‘‘C C’’ genotypes (Table ...inheritance in affected, carrier ... See full document

6

Detecting Loci under Recent Positive Selection in Dairy and Beef Cattle by Combining Different Genome-Wide Scan Methods

Detecting Loci under Recent Positive Selection in Dairy and Beef Cattle by Combining Different Genome-Wide Scan Methods

... incriminated in postmortem meat tenderization in beef cattle ...of selection for components related to this system in the BSW data is somewhat ...model in which the muscle breakdown ... See full document

11

Genome-wide associations of gene expression variation in humans.

Genome-wide associations of gene expression variation in humans.

... applied three standard ...all three suggests that most signals in our analysis are robust and more likely to be true positives, given the distinct theoretical basis for the Bonferroni, permutation, ... See full document

10

Genome-wide identification of molecular mimicry candidates in parasites.

Genome-wide identification of molecular mimicry candidates in parasites.

... junctions in differentiated keratinocytes which was proposed to be involved in barrier formation and epidermal integrity [39], and to plasminogen (P00747), the proenzyme of plasmin which dissolves blood ... See full document

10

Genome-Wide Collation of the Plasmodium falciparum WDR Protein Superfamily Reveals Malarial Parasite-Specific Features.

Genome-Wide Collation of the Plasmodium falciparum WDR Protein Superfamily Reveals Malarial Parasite-Specific Features.

... drop in malaria deaths during the past decade, malaria continues to be one of the biggest health problems around the ...superfamily in eukary- otes, acting as scaffolds for assembling large protein ... See full document

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