[PDF] Top 20 Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs.
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Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs.
... de novo origination rather than ORF expansion drove the origination of hominoid-specific ...de novo genes encoding multiple exons are more likely Figure ...de novo genes. ... See full document
13
A long non-coding RNA regulating cellular reprogramming
... of RNAs capable of repressing the production of ...a non-coding RNA ...a protein nor are translated into one (Huttenhofer et ...of non-coding transfer RNAs (tRNAs) and ... See full document
53
Depicting epigenetic mechanisms involved in the regulation of pseudogene expression
... the genes present there (Vinckenbosch et ...nearby genes, perhaps in the pursuit of the opportunity of being ...modifications from transcribed (H3K4me3 and H3K36me3) and repressed (H3K27me3) ... See full document
47
Non-Coding RNAs : multi-tasking molecules in the cell
... the long intergenic non-coding RNAs (lincRNAs) that range in size from ~300 nucleotides to several thousands and that, in humans, have been estimated to be around 3300, although a more ... See full document
30
Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia.
... the non protein-coding part of the human transcriptome is expanding rapidly, and recently attention has shifted towards the most numerous but still poorly understood group—the long ... See full document
12
Long non-coding RNAs as potential therapeutic targets in human breast cancer
... neighboring coding transcript on the opposite strand are initiated in close genomic proximity; (4) intronic, when derived from an intron of a second transcript; or (5) intergenic, when it is an independent ... See full document
44
Long non-coding RNA expression profiling of mouse testis during postnatal development.
... of protein-coding genes and small non-coding RNAs, such as microRNAs and ...of long (.200 nt) non-coding RNAs (lncRNAs) are transcribed from ... See full document
13
Non-coding RNAs in schistosomes: an unexplored world
... small RNAs (22 nt long) that regulate gene expres- sion of hundreds to thousands genes by partial comple- mentary base pairing to specific mRNAs (a post-tran- scription ...small RNAs ... See full document
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The new world of RNAs
... Unlike mRNAs, miRNA maturation begins in the nucleus and finishes in the cytoplasm. In animals, the nuclear pro- cessing is performed by DROSHA, an RNase type III en- zyme with endonucleolytic activity, which, in ... See full document
9
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes
... support from the US National Science Foundation (grants DEB-1240045 to BG; DEB-1239992 to ...S.), from the Fundação para a Ciência e a Technologia (FCT), Portugal (PTDC/BIA-EVF/ 1499/2014 to ...as ... See full document
11
Expressed sequence tags as a tool for phylogenetic analysis of placental mammal evolution.
... single genes or parts of genes ...mt protein-coding genes yield alignment lengths of about 10–12 kbp, ...the protein-coding genes of complete mt genomes ... See full document
9
Parallel Genome-wide Profiling of Coding and Non-coding RNAs to Identify Novel Regulatory Elements in Embryonic and Maturated Heart
... of genes that were differentially expressed in embry- onic compared to mature ...demarcate genes that showed significant expression changes during the embryonic development, we reanalyzed the transcriptomic ... See full document
16
Transcriptional enhancers in protein-coding exons of vertebrate developmental genes.
... Zebrafish Expression Scoring Using Voice Recognition Embryos were visually scored for EGFP expression between 22–0 hours post-fertilization (judged by direct visualization of the 3-D living embryos from multiple ... See full document
15
Mating of the stichotrichous ciliate Oxytricha trifallax induces production of a class of 27 nt small RNAs derived from the parental macronucleus.
... nt RNAs in the mat24_06 ...nt RNAs at any position on a nanochromosome is 6 times greater than the mean coverage at any position on that nanochromosome), is consistent with a highly non-uniform ... See full document
19
High-throughput, kingdom-wide prediction and annotation of bacterial non-coding RNAs.
... but non-homologous sRNAs ...these non- conserved but functionally homologous sRNAs and their cognate target transcripts will give insights into sRNA-mRNA co-evolution and help elucidate the sequence and ... See full document
12
Circulating small non-coding RNAs provide new insights into vitamin K nutrition and reproductive physiology in teleost fish
... 1002 [108] J. V Fritz, A. Heintz-Buschart, A. Ghosal, L. Wampach, A. Etheridge, D. Galas, P. 1003 Wilmes, Sources and functions of extracellular small RNAs in human circulation, 1004 Annu. Rev. Nutr. 36 (2016) ... See full document
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Iron deprivation in synechocystis: inference of pathways, non-coding RNAs, and regulatory elements from comprehensive expression profiling
... known from several different groups of ...with genes such as isiA or with genes encoding iron trans- ...the coding sequence of gene slr0551 and therefore might constitute its 59-UTR rather ... See full document
21
The genome and transcriptome of Japanese flounder provide insights into flatfish asymmetry
... Detection of RA concentration by ultraperformance liquid chromatogra- phy coupled to tandem mass spectrometry (UPLC–MS/MS). Skin was col- lected from the ocular and blind sides of post-metamorphic flounder ... See full document
9
European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation
... purified from total RNA using poly-T oligo-attached magnetic beads and fragmented using divalent cations at 95°C during 5 ...reads from each of the four lanes were mapped independently on the draft sequence ... See full document
10
Long non-coding RNA LINC00261 sensitizes human colon cancer cells to cisplatin therapy
... b-catenin from cytoplasm into nuclei or it could also promote b-catenin ...target genes such as Myc and CCND1, which are involved in oncogenic ...target genes, then inhibited TCF/LEF/b-catenin ... See full document
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