[PDF] Top 20 Nuclear RNA sequencing of the mouse erythroid cell transcriptome.
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Nuclear RNA sequencing of the mouse erythroid cell transcriptome.
... In sequencing the nuclear RNA pool we were able to identify stable, nuclear-retained ...These RNA species were found to be enriched in the nuclear fraction and many ... See full document
14
De novo transcriptome sequencing of the Octopus vulgaris hemocytes using Illumina RNA-Seq technology: response to the infection by the gastrointestinal parasite Aggregata octopiana.
... Total RNA from the hemocytes of 5 sick and 5 healthy octopuses selected from each group was extracted according to the Invitrogen ...After RNA extraction, samples were treated with ... See full document
15
Characterization of the floral transcriptome of Moso bamboo (Phyllostachys edulis) at different flowering developmental stages by transcriptome sequencing and RNA-seq analysis.
... studies of model plant species showed that the timing of floral induction is controlled by sophisticated regulatory networks that monitor changes in the environment, including autonomous ... See full document
12
A powerful method for transcriptional profiling of specific cell types in eukaryotes: laser-assisted microdissection and RNA sequencing.
... linear RNA amplification method and the emerging RNA-Seq ...cells of Arabidopsis thaliana from which only around 50 are formed within a flower, each of them individually enclosed by an ... See full document
13
Transcriptome sequencing of and microarray development for a Helicoverpa zea cell line to investigate in vitro insect cell-baculovirus interactions.
... some of the most destructive pests of agricultural crops worldwide, including the closely related Helicoverpa zea and ...understanding of cell-virus interactions is ...none ... See full document
15
Transcriptional Slippage and RNA Editing Increase the Diversity of Transcripts in Chloroplasts: Insight from Deep Sequencing of Vigna radiata Genome and Transcriptome.
... deep sequencing of the nuclear and organellar genomes of three mungbean genotypes: Vigna radiata ...and the re- combinant inbred line RIL59 derived from a cross between TC1966 ... See full document
16
Transcriptome sequencing and De Novo analysis of Youngia japonica using the illumina platform.
... Illumina Sequencing The mRNA-seq library was constructed using an mRNA-Seq Sample Preparation Kit (Cat# RS-930-1001, Illumina ...following the manufacturer’s instructions. The poly-(A) mRNA ... See full document
10
RNA CoMPASS: a dual approach for pathogen and host transcriptome analysis of RNA-seq datasets.
... High-throughput RNA sequencing (RNA-seq) has become an instrumental assay for the analysis of multiple aspects of an organism’s ...Further, the analysis of a ... See full document
9
Detection theory in identification of RNA-DNA sequence differences using RNA-sequencing.
... in sequencing technology have allowed for detailed analyses of the transcriptome at single-nucleotide resolution, facilitating the study of RNA editing or sequence ... See full document
12
Endogenous Mouse Dicer Is an Exclusively Cytoplasmic Protein.
... with nuclear pore components and engage in nucleocytoplasmic shuttling ...interaction of Dicer with ribosomal DNA repeats was demonstrated, however, a specific function could not be identified ...fraction ... See full document
14
Pseudo-messenger RNA: phantoms of the transcriptome.
... However, the stop codons must lie at least 50–55 nt upstream of an ...protecting the cell against potentially toxic dominant negative truncated ...but the signal transduction domain is ... See full document
11
A Comparison between Transcriptome Sequencing and 16S Metagenomics for Detection of Bacterial Pathogens in Wildlife.
... used: the Roche 454 GS-FLX pyrosequencing, or the Illumina MiSeq system (Fig ...amplified the V4 hypervariable region of the bacterial 16S ribosomal RNA gene (16S rRNA), ... See full document
21
De novo sequencing and characterization of the floral transcriptome of Dendrocalamus latiflorus (Poaceae: Bambusoideae).
... to the manufac- turer’s instructions (Illumina, San Diego, ...total RNA from each sample and eluted with 10 mM ...synthesis, the purified mRNA was first fragmented into small pieces using RNA ... See full document
13
Interaction of Arabidopsis Trihelix-Domain Transcription Factors VFP3 and VFP5 with Agrobacterium Virulence Protein VirF.
... engineer of plants that exports several virulence proteins into host cells in order to take advantage of the cell machinery to facilitate transformation and support bacterial ...One of ... See full document
23
Dicer is required for haploid male germ cell differentiation in mice.
... during the elongation phase of haploid ...before nuclear condensation had started. This was demonstrated by the high number of uncondensed elongating spermatids as detected by phase ... See full document
12
European sea bass (Dicentrarchus labrax) skin and scale transcriptomes
... species. The sea bass genome (Tine et al. 2014) and the transcriptomes of several tissues (Louro et ...Sanger sequencing of expressed sequence tag (ESTs) libraries or by 454 ...for ... See full document
10
Selection of the temperature of casting the bronzes to plaster moulds
... to the temperature suita- bly: 1200 °C, 1180 °C, 1160 °C and 1140 °C, and then the mould was casted - probe TDAg and plaster mould with thin-walled, so- called casts test slats about dimensions: the ... See full document
6
Transcriptome response to elevated atmospheric CO2 concentration in the Formosan subterranean termite, Coptotermes formosanus Shiraki (Isoptera: Rhinotermitidae)
... genome, transcriptome, metabolome, DNA methylome, and 16S rRNA sequencing (Scharf, ...considering the whole termite (Scharf, ...Sanger sequencing; rarely has Illumina high-throughput ... See full document
23
Genomewide transcriptional reprogramming in the seagrass Cymodocea nodosa under experimental ocean acidification
... from the BLASTx output against Swiss- Prot and UniRef90, and related description are ...composition of putative proteins, as given by Rpstblastn against the Conserved Domains Database (CDD) is also ... See full document
49
Maize gene atlas developed by RNA sequencing and comparative evaluation of transcriptomes based on RNA sequencing and microarrays.
... characterization of genes and pathways underlying plant growth and ...from the analysis of 60 unique spatially and temporally separated tissues from 11 maize organs ...enhance the coverage and ... See full document
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