[PDF] Top 20 Visualization and Differential Analysis of Protein Expression Data Using R.
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Visualization and Differential Analysis of Protein Expression Data Using R.
... the visualization step suggests that most of the variation is not due to the experimental factors, or otherwise shows some level of heterogeneity ...each of the two experimental groups is ... See full document
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Differential Protein Expression in Congenital and Acquired Cholesteatomas.
... image analysis, protein components of the 10 most prominent spots were investigated using matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF ... See full document
11
Biasogram: visualization of confounding technical bias in gene expression data.
... feature of the biasogram is data reduction by projecting the data matrix onto a plane; this approach is often applied in principal component analysis (PCA) and related methods for ... See full document
5
Epigenetic and oncogenic regulation of SLC16A7 (MCT2) results in protein over-expression, impacting on signalling and cellular phenotypes in prostate cancer
... role and importance in signal transduction pathways using the DAVID bioinformatics tool (Figure 3A-3B) ...categories of regulation of cell migration, response to wounding, inlammatory ... See full document
10
Probabilistic protein function prediction from heterogeneous genome-wide data.
... predict protein function from multiple types of genome-wide ...PPI data or co-expression information is converted into a functional linkage graph, in which an edge between nodes represents ... See full document
7
Changes in protein interaction networks between normal and cancer conditions: Total chaos or ordered disorder?
... them. Differential expressions of the signaling protein molecules in normal and cancer conditions for five human tissues ...accumulated and studied using GeneHub-Gepis (an online ... See full document
14
Diurnal Variation Has Effect on Differential Gene Expression Analysis in the Hippocampus of the Pilocarpine-Induced Model of Mesial Temporal Lobe Epilepsy.
... performed using GraphPad Prism ...comparison of gene expression results between epileptic (ZT8) and each ZT of naive group, ...For analysis of diurnal patterns of ... See full document
20
Broad expression analysis of human ANTXR1/TEM8 transcripts reveals differential expression and novel splizce variants.
... one of two anthrax toxin receptors; the other is capillary morphogenesis gene 2 protein (CMG2; ...enhanced expression in certain tumor endothelia, and is thought to be a player in tumor ... See full document
14
Towards decrypting cryptobiosis--analyzing anhydrobiosis in the tardigrade Milnesium tardigradum using transcriptome sequencing.
... process of desiccation [22]. Similarly, it may be part of an adaptive response to maintain ribosomal function in dehydrated ...Out of those, five were down-regulated during dehydration, 20 ... See full document
15
Challenges in using cultured primary rodent hepatocytes or cell lines to study hepatic HDL receptor SR-BI regulation by its cytoplasmic adaptor PDZK1.
... levels and surface expression of hepatic SR-BI is not well ...Some of the features of PDZK1 required to control hepatic SR-BI have been identified in studies involving hepatic ... See full document
8
A human-specific de novo protein-coding gene associated with human brain functions.
... Studies and linkage analyses of nicotine addiction and found one human-specific de novo protein-coding gene, FLJ33706 (alternative gene symbol C20orf203 ...Cross-species analysis ... See full document
11
GRYFUN: a web application for GO term annotation visualization and analysis in protein sets.
... cue of the more frequent terms in a given Set, term enrichment will allow users to ascertain the statistical significance of such ...richment of GO term annotations in protein ...number ... See full document
20
Immunoexpression analysis and prognostic value of BLCAP in breast cancer.
... Associated Protein (BLCAP, formerly Bc10), was identified by our laboratory as being down-regulated in bladder cancer with ...tissues, and several studies have found differential expression ... See full document
10
Investigating ego modules and pathways in osteosarcoma by integrating the EgoNet algorithm and pathway analysis
... understanding of the pathological mechanism of OS may help to achieve new treatments for this ...objective of this study was to investigate ego modules and pathways in OS utilizing EgoNet ... See full document
7
Analysis of Network Attacks and Security Events using Modern Data Visualization Techniques
... the data visualization techniques used in the scope of this work as well as the datasets used to create the ...Much of the research effort was placed on the technique known as Circos, on the ... See full document
89
Analysis of quality and cost of FeSiMg treatment master alloy vs. cored wire in production of ductile cast iron
... cupola- and electric- furnace- melted iron. Investigations of the cupola process carried out at two domestic foundries in parallel with investigations of the efficiency of equipment for cast ... See full document
4
Classification Of Complex UCI Datasets Using Machine Learning And Evolutionary Algorithms
... one of the most researched questions in machine learning and data ...input data into one among the different categories given. A wide range of real problems have been stated as ... See full document
10
Pixualization: Glitch art and Data visualization
... mode of the bytes within the image. The use of the mean in this demonstration is described below, but the other statistical averages could also be used to determine the middle value (median), or the most ... See full document
17
Cognitive reserve and dementia: a scientometric review
... field of CR and dementia. The study of clusters, previously described, showed that cluster #1, cluster #3, and cluster #4, due to bursts of citations, are the major current areas ... See full document
6
Analysis of Network Attacks and Security Events using Modern Data Visualization Techniques
... minimization using operational abstraction [HME03], which is a different approach from the ones already presented until now that share the fact of being based on some kind of coverage ...description ... See full document
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