expressed sequence tags
Expressed Sequence Tags and Gene Prediction
... initiated. Expressed sequence Tags may be used to identify gene transcripts, and are instrumental in gene discovery and in gene-sequence ...
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Expressed sequence tags as a tool for phylogenetic analysis of placental mammal evolution.
... of expressed sequence tags, ESTs, for establishing divergences within the tree of placental ...single sequence reads, the frequency of potential sequencing errors was found to be lower than ...
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In silico differential display of defense-related expressed sequence tags from sugarcane tissues infected with diazotrophic endophytes
... sugarcane expressed sequence tags (EST)-contigs encoding putative defense-related (DR) proteins were evaluated using the Sugarcane EST ...differentially expressed in sugarcane tissues infected ...
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Production of full-length cDNA sequences by sequencing and analysis of expressed sequence tags from Schistosoma mansoni
... parasite sequence based on the positions of alignment start between two ...parasite expressed sequence tags produced by Minas Gerais Genome Network against sequences from the database ...
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Diferential expressed sequence tags of mexican race avocado fruits (Persea americana Mill. var. drymifolia)
... Abstract - In this study, Differential Expressed Sequence Tags (ESTs) of immature fruits of Persea americana Mill var. drymifolia of the state of Nuevo León, Mexico were developed and identified. Ten ...
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Preliminary analysis of microsatellite markers derived from sugarcane expressed sequence tags (ESTs)
... Expressed sequence tags (ESTs) in the sugarcane (Saccharum spp) database (SUCEST) were electronically searched and 402 microsatellites ...simple sequence repeat (SSR) motifs were found, with ...
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Analysis and chromosomal mapping of Leishmania (Leishmania) amazonensis amastigote expressed sequence tags
... generate expressed sequence tags (ESTs) has been used for gene identifica- tion in Plasmodium falciparum (Chakrabarti et ...the sequence of the 36 chromosomes of the ...
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Uma investigação: ESTs (expressed sequence tags) podem ser usados no desenvolvimento de marcadores moleculares baseados em introns?
... Abstract. In the context of large-scale sequencing and genomic programmes, a large set of expressed sequence tags (ESTs) is being generated, which can be used to identify potential molecular markers. ...
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Expressed sequence tags from Atta laevigata and identification of candidate genes for the control of pest leaf-cutting ants.
... Results: The analysis of the expressed sequence tags allowed us to characterize 2,006 unique sequences in Atta laevigata. Sixteen of these genes had a high number of transcripts and are likely ...
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Análise comparativa de algoritmos de agrupamento de ests ( expressed sequence tags )
... Expressed sequence tags (ESTs) are short single pass sequences generated by random sequencing selected clones of a cDNA ...about expressed genes in the cell, they are suited for several ...
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Analysis of expressed sequence tags from Trypanosoma cruzi amastigotes
... 880 expressed sequence tags (EST) originated from clones randomly selected from a Trypanosoma cruzi amastigote cDNA library have been ...mRNAs expressed in amastigotes are related to the ...
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DNA repair-related genes in sugarcane expressed sequence tags (ESTs)
... Sugarcane Expressed Sequence Tag (SUCEST) database against known sequences deposited in other public databases (National Center of Biotechnology Information (NCBI) database and the Munich Information Center ...
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Comparative analysis of differentially expressed sequence tags of sweet orange and mandarin infected with Xylella fastidiosa
... The functional category of putative genes related to energy had the highest number of differentially expressed genes in sweet orange compared to mandarin. This cate- gory includes mainly genes associated with ...
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Differentially displayed expressed sequence tags in Melipona scutellaris (Hymenoptera, Apidae, Meliponini) development
... In order to disclose these developmental func- tions and understand differences and similar- ities among bees, other insects and taxa, we are designing studies using RNA blots, gene-by-gene approach, in situ ...
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Expressed sequence tags in venomous tissue of Scorpaena plumieri (Scorpaeniformes: Scorpaenidae)
... Four-hundred and seventy white colonies randomly selected were grown in liquid culture medium and the recovered plasmid DNA quantified by agarose electrophoresis and digested with EcoR1 to confirm the presence of insert ...
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Survey of transposable elements in sugarcane expressed sequence tags (ESTs)
... To evaluate the polymorphism level between differ- ent sugarcane cultivars generated by any of the TE homo- logues described, we chose an Ac-like clone and a PCR based strategy. Clone SCCCCL4010E02 sequenced from a ...
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Identification and frequency of transposable elements in Eucalyptus
... 123,889 expressed sequence tags of the Eucalyptus Genome Project database and found 124 sequences representing 76 TE in 9 groups, of which copia, MuDR and FAR1 groups were the most ...
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Transcriptome analysis of the gilthead sea bream (sparus auratus) pituitary gland. Type I markers for molecular genetics
... The pituitary gland of vertebrates produces a number of hormones, growth hormone (GH), prolactin (PRL), somatolactin (SL), gonadotrophin (GTH), thyroid stimulating hormone (TSH), and proopiomelanocorticotrophin (POMC), ...
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The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.
... Different protein-coding gene prediction algorithms gen- erally have high concordance rates for predicting exons, but they tend to disagree on the grouping of exons into genes (Reese et al. 2000). Hence, four different ...
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Development and characterization of 1,827 expressed sequence tag-derived simple sequence repeat markers for ramie (Boehmeria nivea L. Gaud).
... Ramie (Boehmeria nivea L. Gaud) is one of the most important natural fiber crops, and improvement of fiber yield and quality is the main goal in efforts to breed superior cultivars. However, efforts aimed at enhancing ...
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