Multilocus sequence typing
Particular Candida albicans strains in the digestive tract of dyspeptic patients, identified by multilocus sequence typing.
... Methods and Findings: Oral swab samples (n = 111) and gastric mucosa samples (n = 102) were obtained from a group of patients who presented dyspeptic symptoms or ulcer complaints. Oral swab samples (n = 162) were also ...
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Multilocus sequence typing as a replacement for serotyping in Salmonella enterica.
... a sequence-based alternative, MultiLocus Sequence Typing (MLST), has gained broad acceptance for many microbial species ...common Sequence Type (ST), and STs that share all but one or ...
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Multilocus sequence typing of Borrelia burgdorferi suggests existence of lineages with differential pathogenic properties in humans.
... ospC typing methods have proven to be useful tools for categorizing ...study, multilocus sequence typing (MLST) was employed to investigate the population structure of ...53 sequence ...
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Multilocus Sequence Typing Scheme versus Pulsed-Field Gel Electrophoresis for Typing Mycobacterium abscessus Isolates
... Outbreaks of infections by rapidly growing mycobacteria following invasive procedures, such as ophthalmological, laparoscopic, arthroscopic, plastic, and cardiac surgeries, mesotherapy, and vaccination, have been ...
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Determinação de cepas de Wolbachia em populações naturais de Solenopsis spp. (Hymenoptera: Formicidae) analisadas via Multilocus Sequence Typing (MLST): diversidade genética, coevolução e recombinação
... o multilocus de Wolbachia, além do gene wsp, a fim de caracterizar as cepas e estabelecer inferências filogenéticas entre ...o multilocus de Wolbachia (gatB, coxA , hcpA, ftsZ e fbpA), totalizando 2079 pb, ...
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Caracterização de isolados clínicos de Candida albicans de estudo brasileiro multicêntrico de candidemia por metodologia de “Multilocus Sequence Typing (MLST)”
... de corrente sanguínea em hospitais terciários no Brasil e 2) determinar se cepas indistinguíveis ou diferentes foram responsáveis pelos episódios de candidemia persistente ou [r] ...
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New multilocus sequence typing of MRSA in São Paulo, Brazil
... MLST was identiied by the PCR ampliication of the S. aureus housekeeping genes in genomic DNA and resulted in approximately 500-bp fragments. For each isolate, the sequences obtained at each locus were compared to the ...
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Occurrence of ESBL-Producing Escherichia coli in Livestock and Farm Workers in Mecklenburg-Western Pomerania, Germany.
... using multilocus sequence typing ...MLST sequence type (ST) 3891 and CTX-M allele to the isolate found in the cattle fecal sample from the same farm, indicating a zoonotic ...
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Genotyping Cryptosporidium andersoni in cattle in Shaanxi Province, Northwestern China.
... spp. Multilocus sequence typing (MLST), based on both length polymorphism and single nucleotide polymorphism (SNP), is a high-resolution typing tool that can accurately describe genetic ...
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Predominant Campylobacter jejuni sequence types persist in Finnish chicken production.
... The European Food Safety Authority (EFSA) Panel on Biological Hazards (BIOHAZ) esti- mated that 50–80% of all campylobacteriosis cases are associated with the chicken reservoir as a whole. The panel has indicated that a ...
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MLVA subtyping of genovar E Chlamydia trachomatis individualizes the Swedish variant and anorectal isolates from men who have sex with men.
... new multilocus variable number tandem-repeat (VNTR) analysis (MLVA) typing system for the discrimination of Chlamydia trachomatis genovar D to K isolates or ...molecular typing methods, ompA gene ...
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TYPING CANDIDA ALBICANS ORAL ISOLATES FROM HEALTHY BRAZILIAN SCHOOLCHILDREN USING MULTILOCUS ENZYME ELECTROPHORESIS REVEALS TWO HIGHLY POLYMORPHIC TAXA Marcelo Fabiano Gomes Boriollo
... three clinics in South Africa and control isolates from healthy individuals (healthy black and white South Africans) were analyzed using DNA fingerprinting with the complex probe Ca3 and cluster analysis (6). In ...
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Molecular epidemiology of human oral Chagas disease outbreaks in Colombia.
... a Multilocus Microsatellite Typing strategy (MLMT) and gene sequencing of the spliced leader intergenic region of mini-exon gene (SL-IR) and a mitochondrial Multilocus Sequence Typing ...
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A novel multilocus variable number tandem repeat analysis typing scheme for African phylotype III strains of the Ralstonia solanacearum species complex
... Methods. We selected different publicly available tandem repeat (TR) loci and additional TR loci from the genome of strain CMR15 as markers. Based on these loci, a new phylotype III-MLVA scheme is presented. MLVA and ...
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The Bacillus cereus group comprises six valid spe- cies, including B. cereus, Bacillus thuringiensis, Bacillus
... Analysis was undertaken to investigate if any of the examined virulence factors could be considered as char- acteristic for a specific phylogenetic lineage. Our results demonstrated that there was no clear association in ...
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Molecular typing techniques employed in the study of
... One of the first molecular techniques applied to study S. aureus epidemiology was the determination of the elec- trophoretic migration profile of plasmids in agarose gels. After the polymerase chain reaction (PCR) ...
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Acinetobacter pittii ST950 clinical isolate carrying
... encoding gene was identified; whereas the gene encod- ing a putative suppressor of F exclusion of phage T7 ( fxsA) was found downstream. Genomic DNA digested with S1-nuclease and plasmid DNA from this strain were ...
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Comparative genotyping of Campylobacter jejuni strains from patients with Guillain-Barre syndrome in Bangladesh.
... Methodology/Principal Findings: C. jejuni HS:23 was a predominant serotype among GBS patients (50%), and no specific serotype was significantly associated with GBS compared to enteritis. PCR screening showed that 38/49 ...
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Multilocus sequence analysis of nectar pseudomonads reveals high genetic diversity and contrasting recombination patterns.
... The Nectar Pseudomonads are Phylogenetically Diverse The combined analysis of multiple house-keeping genes strongly suggested extensive phylogenetic diversity and several origins for the Pseudomonas lineages adapted to ...
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J. Braz. Chem. Soc. vol.28 número3
... To evaluate sequencing efforts, molecular taxonomy was accomplished by retrieving a 16S rRNA gene from BRA 177 genome and submitting it to phylogenetic analysis (Figure 2). The maximum likelihood phylogenetic tree ...
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