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Secondary structures

Conserved secondary structures in Aspergillus.

Conserved secondary structures in Aspergillus.

... of secondary structure within exons agrees with the findings of Katz and Burge [47], who showed computationally that coding region sequences show a greater bias towards forming local RNA structures (as ...

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Secondary structures of rRNAs from all three domains of life.

Secondary structures of rRNAs from all three domains of life.

... Accurate secondary structures are important for understanding ribosomes, which are extremely large and highly ...3D structures of ribosomes as input, we have revised and corrected traditional ...

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Integration of expressed sequence tag data flanking predicted RNA secondary structures facilitates novel non-coding RNA discovery.

Integration of expressed sequence tag data flanking predicted RNA secondary structures facilitates novel non-coding RNA discovery.

... hairpin-like structures which are excised by DGCR8/Drosha dependent endonuclease cleav- age to form pre-miRNAs [1,2,3], which are then exported into the ...

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Clustering Rfam 10.1 : clans, families, and classes

Clustering Rfam 10.1 : clans, families, and classes

... known secondary structures. Since secondary structures have canonical representations in the form of ordered trees, tree alignments (RNAforester [22]) and tree editing [23,24] are the most ...

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Organization and variation of mitochondrial DNA control region in pleurodiran turtles

Organization and variation of mitochondrial DNA control region in pleurodiran turtles

... Potential secondary structures of the repeated sequences in the five pleurodiran turtles’ CR were constructed in this study, and the long repeated motif from each species formed a stable stem-loop structure ...

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Metschnikowia Species Share a Pool of Diverse rRNA Genes Differing in Regions That Determine Hairpin-Loop Structures and Evolve by Reticulation.

Metschnikowia Species Share a Pool of Diverse rRNA Genes Differing in Regions That Determine Hairpin-Loop Structures and Evolve by Reticulation.

... As described above, both highly variable regions were located in the back-folding 39 strands of the hairpins and almost all nucleotides of the variable sites paired with nucleotides of stable positions. This implies that ...

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MicroRNA-target binding structures mimic microRNA duplex structures in humans.

MicroRNA-target binding structures mimic microRNA duplex structures in humans.

... RNA secondary structures in the dot-bracket notation and determines their similarity score ...the structures of miRNA duplexes and miRNA-target bindings to this ...duplex structures. There- ...

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J. Braz. Chem. Soc.  vol.27 número1

J. Braz. Chem. Soc. vol.27 número1

... of secondary structures and the near UV region (260-300 nm) provides information on the tertiary structures of ...the secondary structures of BSA while in the presence of rhenium ...

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Optimization of translation profiles enhances protein expression and solubility.

Optimization of translation profiles enhances protein expression and solubility.

... ondary structures (Fig ...disrupt secondary structures, the third base of five codons downstream of the start codon was ex- changed to A which resulted in M9dH11_opt construct rendering the ...

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A robust and rapid method of producing soluble, stable, and functional G-protein coupled receptors.

A robust and rapid method of producing soluble, stable, and functional G-protein coupled receptors.

... Our study shows that cell-free membrane protein production is a useful technology for expressing milligrams of GPCRs. The receptors could be purified to ,90% purity using immunoaffinity chromatography alone. CD ...

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Prospecção de genes associados ao processo de floração em tomateiro.

Prospecção de genes associados ao processo de floração em tomateiro.

... The MADS box gene family in tomato: temporal expression during floral development, conserved secondary structures and homology with homeotic genes from Antirrhinum and Arabidopsis. The[r] ...

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Earthquakes and robustness for timber structures

Earthquakes and robustness for timber structures

... Satisfactory performance of timber buildings, in general, can be partially attributed to the material characteristics of wood itself, and to the lightness and high redundancy of most wood-based structural systems. The ...

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Deformations of Einstein structures

Deformations of Einstein structures

... Abstract. It is shown that the space of infinitesimal deformations of 2k- Einstein structures is finite dimensional at compact non-flat space forms. More- over, spherical space forms are shown to be rigid in the ...

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Secondary prevention of suicide.

Secondary prevention of suicide.

... Antidepressant medications are the most widely used pharmacological inter- ventions in secondary suicide prevention, but studies of their effectiveness in reduc- ing suicide attempts and completed sui- cides have ...

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Structures et dynamiques de l'espace gabonais

Structures et dynamiques de l'espace gabonais

... ses structures et dynamiques spatiales peuvent être conduites à l’aide de la modélisation graphique, encore peu uti- lisée dans l’étude du continent africain et qui permet de raison- ner suivant une démarche ...

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Preservation of Concrete Shell Structures

Preservation of Concrete Shell Structures

... shell structures located in the main campus of the University of Puebla, in central ...those structures, and what factors should be considered during the design of new spatial ...

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Portugal

Portugal

... In fact, one year before the Revolution, under Marcello Caetano’s government, another reform took place on 25 July 1973. The Minister of Education Veiga Simão made the Basic Education be composed by Primary and ...

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Application of Georadar in Areas with Different Vegetation Cover

Application of Georadar in Areas with Different Vegetation Cover

... managements: Secondary Forest Initial Stage (SFIS), Secondary Forest Medium Stage (SFMS), Secondary Forest Advanced Stage (SFAS), mixed managed pasture (MMP), perennial agriculture (PA) and annual ...

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CHARACTERIZATION OF BIOGENIC, INTERMEDIATE AND PHYSICOGENIC SOIL AGGREGATES OF AREAS IN THE BRAZILIAN ATLANTIC FOREST

CHARACTERIZATION OF BIOGENIC, INTERMEDIATE AND PHYSICOGENIC SOIL AGGREGATES OF AREAS IN THE BRAZILIAN ATLANTIC FOREST

... Averages from six replications. Values followed by the same upper case letters in the same line or same lower case in the same column do not differ by Bonferroni t test (p<0.05). P = physicogenic, I = intermediate and ...

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Optimum Criteria for Developing Defined Structures

Optimum Criteria for Developing Defined Structures

... The enumeration of the structures, properties, advantages and disadvantages of distributed applications facilitate selecting the best struc- ture in a certain problem. Only after this stage the optimization ...

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