[PDF] Top 20 ARTIGO_Functional models in genome-wide selection
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ARTIGO_Functional models in genome-wide selection
... whole genome. Knowledge about the marker locations in reference genomes provides further insights in the search for causal regions and the predic- tion of genomic ...performance in a real LD ... See full document
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Detecting Loci under Recent Positive Selection in Dairy and Beef Cattle by Combining Different Genome-Wide Scan Methods
... SBTAG00000007309) in GYR (P = 1.24610 29 ). ST6GALNAC5 is involved in the synthesis of gangliosides, more particularly the GD1a in the brain ...residues in their structure, mainly ... See full document
11
Development and application of genomic control methods for genome-wide association studies using non-additive models.
... assigned in a way that the SNP was accounted for 0% of total liability variance for type 1 error and ...assigned in such way that each of the SNPs explained the same fraction of non-QTL ... See full document
9
Genome-wide detection of selective signature in Chinese Holstein.
... resulting in some low-frequency functional genes not included in our ...gene models remain ...them in a composite likelihood ...effectively in Human population ...palpable in the ... See full document
9
Genome-wide associations of gene expression variation in humans.
... differences in transcript level are located cis- to the gene in question ...variants. In addition, when we define significance thresholds by focusing on proximal SNPs we detect many more significant ... See full document
10
Genome-wide expression profiling of five mouse models identifies similarities and differences with human psoriasis.
... disease models have made important contributions to the investigation of major disease processes, including for example, heart disease [39], Alzheimer’s disease [40], diabetes [41], cancer [42], as well as ... See full document
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Genome-wide identification of molecular mimicry candidates in parasites.
... outlined in Figure 3. In brief, the parasite proteins were converted to a series of overlapping 14-mers, each of which was searched with ungapped blastp against the control proteomes ...found in all ... See full document
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Diversidade genética, ganhos com seleção e seleção genômica ampla na espécie Coffea arabicaGenetic diversity, selection gains and genome wide selection in the Coffea arabica species
... the selection of superior genotypes by traditional methods is difficult, for they are based exclusively on phenotypic ...2017) in order to accelerate and make breeding programs feasible (Ceccarelli ... See full document
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Genome-wide methylation patterns in Salmonella enterica Subsp. enterica Serovars.
... factor in the virulence of Salmonella, and that a lack of methylation leads to attenuation in animal models ...[17]. In addition, Dam regulates both the phase variation of STM2209-STM2208 ... See full document
13
A map of recent positive selection in the human genome.
... changes in environment and lifestyle. In the last 100,000 years, behaviorally modern humans have spread from Africa to colonize most of the ...globe. In that time, humans have been forced to adapt to ... See full document
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Identification and analysis of genome-wide SNPs provide insight into signatures of selection and domestication in channel catfish (Ictalurus punctatus).
... and selection for important performance traits can impact the genome, which is most often reflected by reduced heterozygosity in and surrounding genes related to traits affected by ... See full document
10
Genome selection in fruit breeding: application to table grapes
... the genome sequence of about 20 plant species including Vitis have been made publicly ...markers in the grape data base, and the grape genome sequence provides insight into the evo- lution of this ... See full document
8
Genome-wide footprints of pig domestication and selection revealed through massive parallel sequencing of pooled DNA.
... porcine genome that putatively have been under ...even in the absence of a complete reference ...allele in a haplotype with low diversity could have increased very rapidly and thus were considered as ... See full document
12
Genome-wide analysis of cold adaptation in indigenous Siberian populations.
... role in the maintenance of stable lipid levels in the ...rates in Siberian populations are due to genetic adaptations in their thyroid hormone signalling ...has in energy ...highlighted ... See full document
11
Genome wide mining of alternative splicing in metazoan model organisms
... splicing in protein coding genes: in human ExonMine detects 88%, Fast DB [de la Grange et ...increase in alternative splicing detected by ExonMine in relation to Fast DB most likely results ... See full document
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Diversidade genética, ganhos com seleção e seleção genômica ampla na espécie Coffea canephoraGenetic diversity, selection gains and genome wide selection in the Coffea canephora species
... approaches. In this study, 72 Coffea canephora genotypes were analyzed in order to identify the SNP markers and apply them in genetic studies and for the selection of parents/hybrids in ... See full document
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Use of direct and iterative solvers for estimation of SNP effects in genome-wide selection
... found in Lawson and Hanson ...the in- verse. It can be seen that the increase in time is approxi- mately exponential and therefore this procedure is feasible only in the case of applications ... See full document
7
Genome-wide selection in soybeans and optimization of phenotyping for grain yield
... low in all trials relative to the completely randomized design ...efficiency in using triple lattice is low relative to RCBD (Table ...(α<0.05) in five of nine trials (55.0%) and significance did ... See full document
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A genome-wide analysis of FRT-like sequences in the human genome.
... location in LINE1 (Figure 6A), on average, FRT-like sequences are more rare in repeated genomic DNA than in unique DNA: repetitive DNA constitutes about 50% of the human genome but only about ... See full document
11
Accounting for Population Structure in Gene-by-Environment Interactions in Genome-Wide Association Studies Using Mixed Models.
... The gene expression on 18,630 probes is collected using Affymetrix HT HG-U133A micro- arrays. The COMBAT software was utilized to correct for batch effects in the expression data [33]. Since the linear regression ... See full document
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