[PDF] Top 20 GenomicLand: Software for genome-wide association studies and genomic prediction
Has 10000 "GenomicLand: Software for genome-wide association studies and genomic prediction" found on our website. Below are the top 20 most common "GenomicLand: Software for genome-wide association studies and genomic prediction".
GenomicLand: Software for genome-wide association studies and genomic prediction
... language and an integrated development environment for statistical procedures and ...R software has been increasingly accepted by universities and companies around the ...statistical ... See full document
7
Genome-wide association study and predictive ability for growth traits in Nellore cattle
... of genomic data can be used to improve the genetic prediction values by increasing the selection accuracy in traits difficult to measure or that are lately measured in the animal life (COLE et ...predict ... See full document
68
Influence of Feature Encoding and Choice of Classifier on Disease Risk Prediction in Genome-Wide Association Studies.
... Various post-hoc methods exist for calculating the adjusted p-values. The Nemenyi test sim- ply multiplies the uncorrected p-values with the number of pair-wise comparisons [47]. We used Shaffer’s static method in our ... See full document
18
Measles contributes to rheumatoid arthritis: evidence from pathway and network analyses of genome-wide association studies.
... known and predicted protein interactions, including direct (physical) and indirect (functional) associations, which are derived from four sources including genomic context, high-throughput ... See full document
9
A network-based approach to prioritize results from genome-wide association studies.
... novel software tool called Network Interface Miner for Multigenic Interactions ...nodes and the interactions between proteins as ...interactions, and weights each protein by use of a modification of ... See full document
12
Genome-wide association studies and clinical outcome in ovarian cancer patients: validation in an independent cohort
... invasion and metastasis and capability to escape to immune response [69, ...by genomic instability and inflammation promoted by tumor cells ...cells and the interaction with several ... See full document
102
Genome wide association studies for milk production traits in Chinese Holstein population.
... regular and standard performance testing (dairy herd improvement, DHI) has been conducted since ...(FP), and protein percentage (PP) were used as phenotypes in this ...the software RUNGE provided by ... See full document
12
Exploiting SNP correlations within random forest for genome-wide association studies.
... [13], and in comparison with other methods, such as classical bayesian regression methods proposed in genomic selection [16] or other supervised learning methods ...These studies show that RF ... See full document
11
Gene networks from genome wide association studies for pigs reproductive traits
... additive genomic breeding values for animals over different environmental gradients, and furthermore it is also possible to estimate single nucleotides polymorphism (SNP) effects over such ...from ... See full document
177
The USDA barley core collection: genetic diversity, population structure, and potential for genome-wide association studies.
... structure and we identified significant marker-trait associations at the corresponding chromosome region (Figure ...the genomic region where the NUD locus is, if the NUD gene had not been previously ... See full document
13
Quantifying the underestimation of relative risks from genome-wide association studies.
... second and third simulations attempt to average over the possible outcomes of our future efforts to map causal mutations, to reveal the likely gains in our ability to stratify individuals on the basis of ... See full document
10
Use of genome-wide association studies for cancer research and drug repositioning.
... Thirdly, by using the Gene Relationships among Implicated Loci (GRAIL), we evaluated the degree of relatedness among the genes within disease regions. GRAIL is a tool to examine the relationships between genes in ... See full document
13
Accounting for Population Structure in Gene-by-Environment Interactions in Genome-Wide Association Studies Using Mixed Models.
... COMBAT software was utilized to correct for batch effects in the expression data ...mean, and excluded probes containing five or more outliers (5% of total ...group and over the entire ... See full document
19
Utilizing twins as controls for non-twin case-materials in genome wide association studies.
... (M-2005-1112 and 2009-2298), GenomEUtwin (EU/QLRT-2001-01254; QLG2-CT-2002-01254), National Institutes of Health (grant DK U01-066134) and the Swedish Foundation for Strategic Research (SSF; ...MH077139 ... See full document
8
Prediction of disease and phenotype associations from genome-wide association studies.
... block, and gene ...longevity and age-related phenotypes (LONG), and early onset extreme obesity (EO) as one group, and sporadic Amyotrophic Lateral Sclerosis (SALS), immunoglobulin A ... See full document
10
Development and application of genomic control methods for genome-wide association studies using non-additive models.
... Genome-wide association studies (GWAS) comprise a powerful tool for mapping genes of complex ...of genomic control (GC) is ...markers and candidate markers are ...frequency ... See full document
9
Probabilistic protein function prediction from heterogeneous genome-wide data.
... computational and experimental ...established and reliable methods for protein function prediction are based on sequence similarity using BLAST [1] and profile methods such as PFAM [2], ... See full document
7
Replication of genome wide association studies of alcohol dependence: support for association with variation in ADH1C.
... cases and 1,248 non-alcohol-dependent ...for Genomic Studies of Addiction (272 from the residential Intensive Addiction Program and 137 from the Outpatient Addiction Program), 97 subjects from ... See full document
7
Gene-centric characteristics of genome-wide association studies.
... GWA studies using ...diseases and phenotypes ...calculate and compare the ability of the chips to capture 1338 nonredundant SNPs in OMIM that affect susceptibility of human diseases, most of which ... See full document
8
International meta-analysis of PTSD genome-wide association studies identifies sex- and ancestry-specific genetic risk loci
... EUA and AFA top hits in the other main ancestry groups (EUA, AFA and AMA, ...larger genomic regions harboring the signal (Supplementary ...any genome-wide significant hits by performing ... See full document
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