Transposable element
Distribution of the Bari-I transposable element in stable hybrid strains between Drosophila melanogaster and Drosophila simulans and in Brazilian populations of these species
... Bari-I transposable element in Drosophila melanogaster (IN(1)AB), its sibling species Drosophila simulans ...Bari-I element among species populations and hybrid ...
5
Effects of envirnonmental and genetic factors on transposable element activity
... in transposable element (TE) composition 2 ...three transposable elements, namely hobo, I-element and P- element, and is usually associated with an increase in mutation rate 1–3 ...
226
RelocaTE2: a high resolution transposable element insertion site mapping tool for population resequencing
... Background. Transposable element (TE) polymorphisms are important components of population genetic variation. The functional impacts of TEs in gene regulation and generating genetic diversity have been ...
12
McClintock: an integrated pipeline for detecting transposable element insertions in whole-genome shotgun sequencing data
... ABSTRACT Transposable element (TE) insertions are among the most challenging types of variants to detect in genomic data because of their repetitive nature and complex mechanisms of replication ...
16
Stem loop sequences specific to transposable element IS605 are found linked to lipoprotein genes in Borrelia plasmids.
... Could the Borrelia free-standing stem loop sequences be focal points for formation of new RNA genes? Small regulatory RNAs have been found in Borrelia [17,18] and several RNA-type structures of 120–150 nt with long stem ...
10
Distribution and conservation of the transposable element gypsy
... of transposable elements (T’S) in the genome of host species, we investi- gated the distribution, representativeness and conservation of DNA sequences homologous to the Drosophila melanogaster gypsy ...
6
Mapping of a Leishmania major gene/locus that confers pentamidine resistance by deletion and insertion of transposable element
... element of Drosophila melanogaster (mosK) into the deleted insert to work as primer island. Using general molecular techniques, we described here this method that permits a quickly identification of a functional ...
4
Genome organization and gene expression shape the transposable element distribution in the Drosophila melanogaster euchromatin.
... P element insertion patterns in ...of element insertions in and around germline-expressed genes relative to soma-expressed ...P element and over the short term (over one generation), by identifying ...
12
Effects of environment and genetic backgroung on transposable element activity in Drosophila melanogaster
... In general, we observed no association between the number of novel or total insertions and the expression levels for the corresponding TEs in adult ovaries. The only TEs for which we saw higher levels of expression in ...
46
Identification and frequency of transposable elements in Eucalyptus
... senting each of the F values within a given library. Our re- sults are shown in Figure 2, which also shows the relative contribution of each of the groups of TE to FL values. These values vary from zero to 1.96, with a ...
6
The biology and potential for genetic research of transposable elements in filamentous fungi
... pattern. Transposable elements can also change the gene sequence due to the ‘footprints’ generated in the donor site on excision of the transposable element and chromosome rearrangements such as ...
10
Survey of transposable elements in sugarcane expressed sequence tags (ESTs)
... The SUCEST database contains sugarcane cDNA partial sequences of 37 libraries from different tissues, physiological and stressed conditions (Vettore et al., 2001). Sequence comparisons against GenBank were available for ...
8
Cooperation is fleeting in the world of transposable elements.
... 202 completely sequenced bacterial genomes as well as multiple extrachromosomal DNA molecules. The ISs IS1, IS2, IS3, IS51, IS150, IS407, IS4, IS5, IS427, IS903, IS1031, ISH1, ISL2, IS6, IS21, IS30, IS66, IS91, IS110, ...
8
Ancestral polymorphism and recent invasion of transposable elements in Drosophila species
... the transposable element sequences are significantly lower than those for the host genes, then Bari was likely transferred after the species divergence, through horizontal transfer or species ...
12
Transposable elements in TDP-43-mediated neurodegenerative disorders.
... A large fraction of the genetic material of multicellular organisms is made up of mobile elements as well as inactivated TEs. A fraction of these TEs retain the capacity to copy themselves and insert at new genomic ...
10
Scattered organization of the histone multigene family and transposable elements in Synbranchus
... mapping studies carried out on Neotropical fishes were fo- cused on the location of ribosomal sites, and there is still very little information regarding other types of sequences, such as histone genes and ...
7
Chromosomal organization and evolutionary history of Mariner transposable elements in Scarabaeinae coleopterans
... some transposable ele- ments may be overabundant in specific regions of chro- mosomes, and the results obtained with the mapping of Mariner shows that these sequences are not randomly distributed and have ...
9
An axisymmetric nodal averaged finite element
... A nodal averaging technique which was earlier used for plane strain and three-dimensional problems is extended to include the axisymmetric one. Based on the virtual work principle, an expression for nodal force is found. ...
11
Ideology as a dominant paratextual element in translation
... an element which, according to us, should be considered as paratextual, namely ideology, understood as the sense of the otherness of language, since “the organizing centre of any utterance, of any experience, is ...
15
An objectoriented framework for finite element programming
... sive use of Inheritance and Polymorphism has been carried out, allowing a great amount of code reuse. To give an example, the geometrically nonlinear elements were implemented through the derivation of the basic ...
10