[PDF] Top 20 Deep Whole-Genome Sequencing to Detect Mixed Infection of Mycobacterium tuberculosis.
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Deep Whole-Genome Sequencing to Detect Mixed Infection of Mycobacterium tuberculosis.
... Deep whole genome sequencing, which is based on the next generation sequencing tech- nology, provides ultimate resolution for typing MTB ...mapping sequencing reads to a ... See full document
14
Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences
... tools to guide treatment options for patients with MDR-TB, XDR-TB and post XDR (TDR-TB) dis- ...compared to phenotypic ...sensitivity of GenoType MTBDRplus (Hain Life-Science) for the detection ... See full document
10
Identifying Likely Transmission Pathways within a 10-Year Community Outbreak of Tuberculosis by High-Depth Whole Genome Sequencing.
... unlikely to be the ancestral source of the group containing c9, c16, c30 and ...factor to consider is the fact that although M. tuberculosis organisms found in a single granuloma are typically ... See full document
15
Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences
... tools to guide treatment options for patients with MDR-TB, XDR-TB and post XDR (TDR-TB) dis- ...compared to phenotypic ...sensitivity of GenoType MTBDRplus (Hain Life-Science) for the detection ... See full document
10
Examination of Mycobacterium avium subspecies paratuberculosis mixed genotype infections in dairy animals using a whole genome sequencing approach
... for mixed genotype infections by mycobacteria, including other subspecies of ...risk of exogenous reinfection with multiple strains of M. tuberculosis, some of which had ... See full document
13
Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study.
... expansion of one specific clone ...attempted to calculate the apparent relative reproductive fitness of this ...number of cases per year represented an estimate of the average number ... See full document
12
Tracking Dengue Virus Intra-host Genetic Diversity during Human-to-Mosquito Transmission.
... (DENV) infection of an individual human or mosquito host produces a dynamic population of closely-related ...thought to offer an advantage for arboviruses to adapt as they cycle between ... See full document
21
Rev. Soc. Bras. Med. Trop. vol.48 número1
... suggestive of characteristic lesions of atypical mycobacterial ...diagnosis of tuberculosis and are not considered routine investigations (7) (11) ... See full document
3
Dynamics of hepatitis B virus quasispecies in association with nucleos(t)ide analogue treatment determined by ultra-deep sequencing.
... DNA sequencing technology [18]. The ultra-deep sequencers allow for massively parallel amplification and detection of sequences of hundreds of thousands of individual ... See full document
10
J. Bras. Nefrol. vol.36 número4
... submitted to a well-established routine concerning TB diagnosis (and latent TB ...use of anti-TB drug), and imaging tests (chest ...use of tuberculin skin test (PPD) and interferon-gamma release ... See full document
3
Whole Genome Sequence of Multiple Myeloma-Prone C57BL/KaLwRij Mouse Strain Suggests the Origin of Disease Involves Multiple Cell Types.
... gammopathy of undetermined significance (MGUS) is the requisite precursor to multiple myeloma (MM), a malignancy of antibody-producing plasma ...basis of MGUS and its progression to MM ... See full document
13
The variability and reproducibility of whole genome sequencing technology for detecting resistance to anti-tuberculous drugs
... number of SNPs between the Samtools and GATK algorithms decreased as the depth of coverage and allelic frequency thresholds in- ...excess of 20-fold had no impact on variants ...consisted of ... See full document
9
J. bras. pneumol. vol.35 número4 en v35n4a09
... proportion of CHAP representatives who had attended training programs was high, which is consistent with the epidemiological situation of the city and its classification as one of the eight PNCT ... See full document
8
Exogenous Re-infection by Multiple Exposures to <i>Mycobacterium tuberculosis</i> Contributes to Subsequent Development of Active Tuberculosis
... majority of tuberculosis (TB) exists in the world’s poorest countries, where costly biosafety level three facilities for containment of infectious TB patients and diagnostic facilities are not ... See full document
6
Genetic signatures of Mycobacterium tuberculosis Nonthaburi genotype revealed by whole genome analysis of isolates from tuberculous meningitis patients in Thailand
... reported to be unique to members of lineage 1 (Coll et ...belonging to lineage 1, we found out that it was absent in the three isolates in this study and in 6 other Nonthaburi isolates from ... See full document
20
Hereditary cancer risk assessment: insights and perspectives for the Next-Generation Sequencing era
... sis of multiple genes in a cost- and time-effective ...databases of genes with high- and moderate-risk are often not population-specific, with non-Caucasian pop- ulations often being ...lead to ... See full document
5
Microbiota present in cystic fibrosis lungs as revealed by whole genome sequencing.
... members of the microbiota are concerned, cultures detected yeasts in sputum 1, and ...belonged to that genus. Notably, in contrast to the eubacterial PCRs, pan-fungal PCRs necessitated previous ... See full document
7
Characterization of the small RNA content of Trypanosoma cruzi extracellular vesicles
... summary of all data obtained and analyzed in the present work can be found in Tables S1A-I and S2A-G, respec- ...aligned to the genome (no hit) were the second most abundant class in mVes (13%) and ... See full document
4
Fernando MitanoI , Amélia Nunes SicsúI , Luciana de Oliveira SousaI , Rarianne Carvalho PeruhypeI, Jaqueline Garcia de Almeida BallesteroI , Pedro Fredemir PalhaI
... tions of production, denounces the failure to send information to higher ...lack of use of modern technology for the fluid transmission of information related to the ... See full document
8
Tuberculosis of Capitate Bone in A Skeletally Immature Patient: A Case Report
... Primary Tuberculosis of wrist joint and carpal bone is rare, and when occurring it usually affects ...case of isolated tuberculosis of capitate bone; which was confirmed with ... See full document
3
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