[PDF] Top 20 DNA repair-related genes in sugarcane expressed sequence tags (ESTs)

DNA repair-related genes in sugarcane expressed sequence tags (ESTs)

... the repair mechanisms both in- volve a single enzymatic step that has a similar mechanism (Sancar, 2000; Vonarx, et ...(PhrI) in prokaryotes and the other Class II CPD photolyase (PhrII) in ... See full document

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Sugarcane expressed sequences tags (ESTs) encoding enzymes involved in lignin biosynthesis pathways

... esters in both tobacco (Atanassova et ...1995). In the SUCEST data bank 30 cluster consensus sequences related to CCoAOMT were found ( I), showing e-values between 9e-54 and ...were related to ... See full document

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In silico differential display of defense-related expressed sequence tags from sugarcane tissues infected with diazotrophic endophytes

... 277 sugarcane expressed sequence tags (EST)-contigs encoding putative defense-related (DR) proteins were evaluated using the Sugarcane EST ...involved in cell death ... See full document

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Preliminary analysis of microsatellite markers derived from sugarcane expressed sequence tags (ESTs)

... the sequence flanking the repeat unit, are used with genomic DNA in PCR reactions they reveal simple sequence repeat (SSR) polymorphisms representing different alleles at that locus (Gupta et ... See full document

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Analysis and chromosomal mapping of Leishmania (Leishmania) amazonensis amastigote expressed sequence tags

... (Figure). In control experiments using total DNA of ...proteinase genes, and 24S α -rRNA with ...mapped in a single band, whereas two EST (LlaAm0088) and the 24Sα-rRNA hybridized to two ... See full document

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Distribution of DNA repair-related ESTs in sugarcane

... general DNA repair pathways, removing a large spectrum of structurally unrelated DNA lesions that generate considerable helical distortion in DNA (Prakash and Prakash, 2000; de Boer and ... See full document

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Dissecting the sugarcane expressed sequence tag (SUCEST) database: unraveling flower-specific genes

... end in the Sugarcane Expressed Sequence Tag (SUCEST) database, which have been obtained from 37 cDNA libraries prepared from different ...of expressed sequence tags (ESTs) ... See full document

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Survey of transposable elements in sugarcane expressed sequence tags (ESTs)

... ent sugarcane cultivars generated by any of the TE homologues described, we chose an Ac-like clone and a PCR based ...length sequence of this clone resulted in a 1081 bp poliA + fragment homologous ... See full document

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Base excision repair in sugarcane

... resulting in cell death and/or mutations. The low frequency of mutagenesis in cells is due to the presence of enzymatic pathways which repair damaged ...Several DNA repair genes ... See full document

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Expressed sequence tags as a tool for phylogenetic analysis of placental mammal evolution.

... of sequence data were available, a circumstance that rendered many ordinal relationships ...of sequence data were generally based on single genes or parts of genes ...tool in ... See full document

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Biosynthesis of secondary metabolites in sugarcane

... of genes related to secondary metabolism was extracted from the sugarcane expressed sequence tag (SUCEST) database and was used to investigate both the gene expression pattern of key ... See full document

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ATM-mediated transcriptional and developmental responses to gamma-rays in Arabidopsis.

... increases in the columella and in the vascular system following the upregulation of many genes that are essential for the hormone ...act in concert with ANT-mediated polarity of the organ, as ... See full document

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Expressed sequence tags in venomous tissue of Scorpaena plumieri (Scorpaeniformes: Scorpaenidae)

... por genes relacionados com a expressão de proteínas, proteínas regulatórias e ...de DNA mostram semelhanças com lectinas encontradas em peixes. A análise in silico destes clones confirmam a ... See full document

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Expressed sequence tags from Atta laevigata and identification of candidate genes for the control of pest leaf-cutting ants.

... as related to immunity or antixenobiosis in ...products in leafcut- ters exposed to adverse conditions, helping us to under- stand the molecular basis of pest ant resistance to hazardous ...envisaged ... See full document

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Multiple Gene Sequence Analysis Using Genes of The Bacterial DNA Repair Pathway

... 2008). In general, HGT tends to occur between the closely related organisms, more extensively between the genera and species than at the level of phylum or family (Staley ...2009). In this work, ... See full document

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Patterns of expression of cell wall related genes in sugarcane

... for genes related to cell wall metabolism in the sugarcane expressed sequence tag (SUCEST) database ...resulted in 3,283 reads (1% of the total reads) which were grouped ... See full document

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Molecular chaperone genes in the sugarcane expressed sequence database (SUCEST)

... that, in Escherichia coli, the average percentage protein mass of GroEL and GroES is ...observed in sugarcane. Our data indicated that sugarcane GroEL-like and GroES-like related ... See full document

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Expressed Sequence Tags and Gene Prediction

... proteomics. DNA sequences are thus processed in order to locate genes and then study of their functions is ...initiated. Expressed sequence Tags may be used to identify gene ... See full document

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A search for homologues of plant photoreceptor genes and their signaling partners in the sugarcane expressed sequence tag (Sucest) database

... nuclear DNA sequences using a ...complete sequence of this gene is not in the Sucest ...existent sugarcane PHYB sequence, against several complete sequences from current ...presented ... See full document

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Initiation of genome instability and preneoplastic processes through loss of Fhit expression.

... initiated in sporadic neoplasias is unknown. In early preneoplasias, alterations at chromosome fragile sites arise due to DNA replication ...alteration in preneoplasias is deletion within the ... See full document

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