[PDF] Top 20 SNBRFinder: A Sequence-Based Hybrid Algorithm for Enhanced Prediction of Nucleic Acid-Binding Residues.
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SNBRFinder: A Sequence-Based Hybrid Algorithm for Enhanced Prediction of Nucleic Acid-Binding Residues.
... a sequence-based hybrid algorithm SNBRFinder for predicting nucleic acid-binding ...the sequence-based template method, which can effectively ... See full document
23
Prediction of Spontaneous Protein Deamidation from Sequence-Derived Secondary Structure and Intrinsic Disorder.
... Asparagine residues in proteins undergo spontaneous deamidation, a post-translational modification that may act as a molecular clock for the regulation of protein function and turn- ...local ... See full document
14
Prediction of RNA binding residues: an extensive analysis based on structure and function to select the best predictor.
... the binding sites [20]. Cheng et al. (2008) proposed a method based on smoothed PSSM along with dependency of neighboring residues ...ensemble based method using three algorithms such ... See full document
8
Modeling and dynamics of the inward-facing state of a Na+/Cl- dependent neurotransmitter transporter homologue.
... Design of the inward-facing LeuT ...10% sequence identity in the LeuT- fold core region, thus homology modeling could not be applied directly, and a structure-based modeling approach was ... See full document
14
A modern mode of activation for nucleic acid enzymes.
... mode of activation to other catalytic nucleic ...All of these nucleic acid enzymes share a relatively similar ...site of the substrates is located in the middle of the two ... See full document
7
cDNA cloning and 1.75 Å crystal structure determination of PPL2, an endochitinase and N-acetylglucosamine-binding hemagglutinin from Parkia platycephala seeds
... determination of PPL2. (A) MALDI-TOF mass determination of native PPL2 purified by affinity chromatography as illustrated in the ...fraction of a Parkia platycephala seed homogenate precipated with ... See full document
13
PredPPCrys: accurate prediction of sequence cloning, protein production, purification and crystallization propensity from protein sequences using multi-step heterogeneous feature fusion and selection.
... use sequence-derived features that can be readily exploited by experimental ...propensity of protein targets with sequence lengths ranging from 46 to 200 amino ...types of ... See full document
17
Isolation, biochemical and antibiofilm effect of a lectin from the marine sponge Aplysina lactuca
... Sponge lectins have shown a large spectrum of antibacterial activities. For instance, the lectin isolated from Suberites domuncula displays antibacterial activity against E. coli and S. aureus [15]. According to ... See full document
10
Rapid estimation of binding activity of influenza virus hemagglutinin to human and avian receptors.
... The binding of an influenza virus to a host cell can be approximated by the interaction between HA and the host receptor analog, sialyloligosaccharides ...when binding to HAs, the pentasccharide ... See full document
9
Prediction of nucleosome positioning based on transcription factor binding sites.
... selection algorithm, the nearest neighbor algorithm (NNA), and the incremental feature selection (IFS) method were used to identify the most important TFs that either favor or inhibit nucleosome positioning ... See full document
7
A new colorimetric peptide nucleic acid-based assay for the specific detection of bacteria
... similarity of the ...DLs of others methods based on ELISA, which are usually between 105 and 106 CFU/ml [40–43]; or even PNA-FISH, which are approximately 105 CFU/ml ...estimation of the DL ... See full document
16
A HYBRID OPTIMIZATION ALGORITHM BASED ON GENETIC ALGORITHM AND ANT COLONY OPTIMIZATION
... dependency of cycle to the previous one to prevent premature convergent in ...chromosomes of GA are utilised to optimize the number of next city visited from each ant, in order to avoid dependency on ... See full document
13
A new fuzzy algorithm for ecological ranking
... kinds of environmental decisions. It requires a set of “objects” ...alternatives of environmental management) to be evaluated on the basis of multiple weighted criteria, and then ranked from ... See full document
3
Adiabatic Differential Scanning Calorimetric Study of Divalent Cation Induced DNA - DPPC Liposome Formulation Compacted for Gene Delivery
... light of recent strong evidence that divalent cations enhance the efficacy of plasmid DNA-cationic lipid formulations (Lam and Cullis, 2000), it is of particular interest to study the effect ... See full document
5
M2e-displaying virus-like particles with associated RNA promote T helper 1 type adaptive immunity against influenza A.
... femur of WT, MyD88 2/2 and TRIF 2/2 mice (all in the Bl/6 background) with ice-cold ...mg of VLP-1123, VLP-1632, VLP-1818, VLP-1965 or 1 mg ODN 1826 (Invivogen, San Diego, CA) for 20 ... See full document
12
A Fast Hybrid Algorithm Approach for the Exact String Matching Problem Via Berry Ravindran and Alpha Skip Search Algorithms
... matching algorithm had been an essential means for searching biological sequence ...development of enhanced algorithms have even become more critical as the major concern had always been how ... See full document
7
A METHOD OF TARGET TRACKING AND PREDICTION BASED ON GEOMAGNETIC SENSOR TECHNOLOGY
... scheme based on geomagnetic sensor technology, a target is in a perceptible state as it passes through nodes, which provide the velocity ...and prediction algorithm put forward in this paper needs to ... See full document
17
From SOMAmer-based biomarker discovery to diagnostic and clinical applications: a SOMAmer-based, streamlined multiplex proteomic assay.
... bead-based nucleic acid readout is suitable for measurements involving such subtle analyte concen- tration differences in the region of endogenous levels, we spiked in analytes in 20% ... See full document
13
Caracterização biofísico-química da enzima Orotato Fosforibosiltransferase (OPRT, EC 2.4.2.10) de Mycobacterium tuberculosis H37Rv : modelo para o desenvolvimento de novas drogas anti-tuberculose
... ADSL crystallographic data could not provide unequivocal evi- dence of amino acid residues involved in substrate binding specific- ity, especially for being a single substrate enz[r] ... See full document
186
Semantic Web Improved with IDF Feature of the TFIDF Algorithm
... technique of Social Annotations for the Semantic ...point of views during their actual usage of the web ...example of social bookmark service, it can be shown how emergent semantics can be ... See full document
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