[PDF] Top 20 The utility of shallow RNA-Seq for documenting differential gene expression in genes with high and low levels of expression.
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The utility of shallow RNA-Seq for documenting differential gene expression in genes with high and low levels of expression.
... criticism of the broad significance of the results of the previous section might be that venoms, and genes important for glands in general, may show very ... See full document
11
High-resolution transcriptome of human macrophages.
... background levels. This suggested that the assessment of differential expression using RNA-seq might lead to an improved resolution in comparison to array-based ... See full document
16
Transcriptome-Wide Analysis of Hepatitis B Virus-Mediated Changes to Normal Hepatocyte Gene Expression.
... particularly the ability to replicate indefinitely. For example, while a recent RNA-seq analysis of HBV-mediated gene expression changes in the Huh7 cell line did ... See full document
35
WNT5A inhibits metastasis and alters splicing of Cd44 in breast cancer cells.
... Wnt. Low expression of WNT5A is correlated with poor prognosis in breast cancer ...patients. The highly invasive breast cancer cell lines, MDA-MB-231 and 4T1, express very ... See full document
12
Genome-wide analysis reveals the unique stem cell identity of human amniocytes.
... transcript levels of stem cell markers across individual patients, we analyzed 37 RNA-seq datasets, representing 11 isolates from patients at different gestational ages and different ... See full document
16
Transcriptomic analysis of differential gene expression reveals an increase in COX2 levels during in vitro canine herpesvirus infection
... death in neonates and immunosuppressed ...respiratory, and neurological problems in adult animals. Viral pathogenesis and host genes expressions during of CaHV-1infection ... See full document
13
Chilling-Mediated DNA Methylation Changes during Dormancy and Its Release Reveal the Importance of Epigenetic Regulation during Winter Dormancy in Apple (Malus x domestica Borkh.).
... mitigate the chilling temperature of winters. However, acquisition of sufficient chilling during winter dor- mancy ensures the normal phenological traits in subsequent growing ...Thus, ... See full document
25
Glutathione S-Transferase Regulation in Calanus finmarchicus Feeding on the Toxic Dinoflagellate Alexandrium fundyense.
... During the July experiment, high-throughput sequencing was performed on ...2 and 5 of the experiment. A total of 18 RNA-Seq libraries (3 replicates × 3 treatments × ... See full document
17
ANOVA-like differential expression (ALDEx) analysis for mixed population RNA-Seq.
... downshocks in microarray, responds to HCl but not acetic or lactic, responds to nonlethal acid downshocks by any acid, and responds to HCl only with retarded ...examined the overlap between ... See full document
15
Trypanosoma cruzi transcriptome during
... redundancy in T. cruzi gene annotation and read counts, clusters of orthologous genes were determined based on nucleotide sequence similarity and named as supra genes ... See full document
13
Transcriptome analysis of chlorantraniliprole resistance development in the diamondback moth Plutella xylostella.
... occurs in all insects, and a number of enzymes with insecticide detoxication mechanisms, encoded for by members of the P450, GST and COE multi-gene families, have ... See full document
13
Strand-Specific RNA-Seq Analyses of Fruiting Body Development in Coprinopsis cinerea.
... Total RNA was extracted from each sample with an RNeasy Plant Mini kit (Qiagen), in which the first reagent of the kit (Buffer RLC) was added to the frozen tissue, ... See full document
23
Microarray expression profiles of 20.000 genes across 23 healthy porcine tissues.
... between the expression in each of the 23 tissues and the overall expression defined by the expression in other 22 ...tissues. The ... See full document
10
Small-subunit rRNA processome proteins are translationally regulated during differentiation of Trypanosoma cruzi
... Cloning of the TcSof1 gene. We used differential display to identify genes differentially expressed in metacyclic trypomas- ...tigotes. The polysomal RNA fraction ... See full document
9
Location-specific responses to thermal stress in larvae of the reef-building coral Montastraea faveolata.
... Changes in water temperature can modify embryonic develop- mental rates and thereby alter gene expression ...that expression differences among temperatures for a given sampling time ... See full document
11
Heterogeneous Effects of Direct Hypoxia Pathway Activation in Kidney Cancer.
... re-expression in 786-O cells. (A) HIF-1α binding sites in the HIF-1α re-expressing cells were identified by peak calling and ranked on the vertical axis according to signal ... See full document
19
Perfil de expressão dos genes MYC, MYCN, TERT, ASPM e PRAME em Meduloblastoma
... are the most common malignant tumors of central nervous system in the ...childhood. The incidence is about 19-20% between children youngest than 16 years old, and with ... See full document
77
Gene expression in sows with high and low ovulation rate, high and low birth weight litter and the effect of sow catabolic status on embryonic gene expression
... apoptosis of GC in mammals, where BCL2 over-expression is related with reduced follicular atresia and increased litter size (Hsu et ...2004). In the current study BAX mRNA ... See full document
128
Synthesis of nanoparticeles in ductile iron with small additions of vanadium and niobium and its mechanical properties
... grinding and polishing. Back scattered electrons (BSE) were utilized in SEM in order to reveal difference in chemical compositions of microcomponents present in particular ... See full document
8
The Influence of Small Amounts of Aluminium on the Spheroidization of Cast Iron with Cerium Mischmetal
... concerning the data gathered in Tables 4-7 and photographs presenting both the shape, the magnitude, and the distribution of graphite precipitates (Figs 1, 3, 5, ... See full document
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