Genome evolution
Polyploidization as a retraction force in plant genome evolution: sequence rearrangements in triticale
... host genome by a copy and paste method of transposition ...increase genome size, and therefore have an important role in genome evolution and ...
11
Strict host-symbiont cospeciation and reductive genome evolution in insect gut bacteria.
... reductive genome evolution have been identified in obligate endocellular insect symbionts, but no such example has been identified from extracellular ...molecular evolution, and reduced genome ...
11
Genome evolution and the emergence of fruiting body development in Myxococcus xanthus.
... [3]. Genome sequencing has revealed substan- tial rates of foreign gene acquisition ...genotype evolution at the level of sub-speciation and by extension LGT may aid bacterial ...
9
Comparative phylogenomics uncovers the impact of symbiotic associations on host genome evolution.
... of genome and transcriptome sequences available, tracking convergent gene losses by comparative phylogenomic frameworks such as BigPlant opens the way to discover new gene networks and pathways toward a better ...
12
Patterns of genome evolution among the microsporidian parasites Encephalitozoon cuniculi, Antonospora locustae and Enterocytozoon bieneusi.
... the genome made it difficult to separate genes without introducing deleterious breakpoints [10], a factor noted to contribute to conservation of gene order in other genomes as well ...
8
Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains
... The genetic composition of PAIs can shed light on the lifestyle of pathogenic bacteria, since they include virulence genes that mediate mechanisms of adhesion, invasion, colonization, prolifer- ation into the host and ...
16
Evolution Analysis of Simple Sequence Repeats in Plant Genome.
... on genome sequences, and play many important roles in ...the evolution of plant genomes, we investi- gated the evolutionary regularities of SSRs during the evolution of plant species and the plant ...
18
Insights from the complete chloroplast genome into the evolution of Sesamum indicum L.
... cp genome evolution in almost all publically- available cp genomes, ...cp genome size [30,51] and formation of pseudogenes at IR/SC ...on genome size [52], which has also been the case in our ...
11
It's no fluke: the planarian as a model for understanding schistosomes.
... Studies of model organisms (e.g., yeast, ciliated protozoans, nematode worms, and fruit flies) have shaped our understanding of central questions in biology (e.g., cell-cycle control, telomerase function, programmed cell ...
5
Universal global imprints of genome growth and evolution--equivalent length and cumulative mutation density.
... the evolution of genomic ...of genome evolution ...driving genome growth, because it does not give rise to gene duplication [3–8], and because the pace of evolution based on point ...
15
Recombination and evolution of duplicate control regions in the mitochondrial genome of the Asian big-headed turtle, Platysternon megacephalum.
... Positions of the duplicate control regions were identified from locations of tRNA genes (tRNA Pro and tRNA Phe for CR1; tRNA Pro and tRNA Gln for CR2) in the genome using tRNAscan-SE 1.21. ...
8
Parasite Genome Projects and the Trypanosoma cruzi Genome Initiative
... The molecular karyotype of CL-Brener (Santos et al. 1997) - Karyotype analysis under different resolutions, chromosomal marker production and linkage analyses have been carried out by differ- ent groups and, depending on ...
4
An Annotated Draft Genome of the Mountain Hare (Lepus timidus)
... De novo assembly was performed using ALLPATHS-LG (Gnerre et al. 2011) with default parameters using OPE and mate-pair reads. The resulting assembly was evaluated with REAPR v1.0.18 (Hunt et al. 2013) to break incorrect ...
7
Digital evolution.
... Themostimportantdifference, insistsAdami,‘isthepossibility ofrewardstoprogramsifthey accomplishinterestingthings,in thiscasecomputations’.Hedrawsa parallelbetwe[r] ...
4
Origin, evolution and genome distribution of microsatellites
... the evolution of the repetitive sequences, which constitute microsatellites in order to formulate models that fit the characteristics of such ...their evolution and aspects related to their gen- esis, ...
14
The contributions of the Genome Project to the study of schistosomiasis
... the genome sequence, have produced essential contribu- tions to a global understanding of how the parasites dis- play sexual differentiation (Waisberg et ...the genome data to enable the community to make ...
35
Expression and characterization of thermostable glycogen branching enzyme from Geobacillus mahadia Geo-05
... The genome sequence of Geobacillus mahadia Geo-05 used in this research was contributed by Malaysia Genome ...Geo-05 genome (Hall, 2010; EMBL-EBI, 2010; NCBI, ...
12
Identifying Human Genome-Wide CNV, LOH and UPD by Targeted Sequencing of Selected Regions.
... a genome[33] on WGS data would be more suitable to pinpoint breakpoints, to identify novel cross-chromosome events, and to completely characterizing the full spectrum of CNV and ...
18
Association Study of an AFF1 Gene Polymorphism (rs340630) with Iranian Systemic Lupus Erythematosus Patients
... Familial aggregation demonstrates that both gene tic and environmental factors play an important role in the pathogenesis of SLE. Genetic studies have been per- formed using candidate gene approaches and recently, ...
6
A genome-wide analysis of FRT-like sequences in the human genome.
... The comparative analysis of sequence features of functional genomic FRT-like sequences (Figure 1B) vs. non-functional ones (marked ‘–’ in Figure 1C) suggested a set of rules that can distinguish between the two groups. ...
11