Structure-based
SMOG 2: A Versatile Software Package for Generating Structure-Based Models.
... folding, structure-based models (SBMs) have since been extended to probe a diverse range of biomolecular processes, spanning from protein and RNA folding to functional tran- sitions in molecular ...a ...
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Sequence- and Structure-Based Immunoreactive Epitope Discovery for Burkholderia pseudomallei Flagellin.
... In this context, we focused on flagellin from B. pseudomallei as a target for epitope discovery and design, using both sequence-based and 3D structure based approaches. Flagellins from diverse ...
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Towards universal structure-based prediction of class II MHC epitopes for diverse allotypes.
... or structure-based. Using a similar structure-based approach for class I MHC epitope prediction, we previously obtained an AUC of ...the structure-based method, discovering ...
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A structure-based model for predicting serum albumin binding.
... in structure-based drug discovery have focused on the elimination of conformer ‘‘noise’’ from a structural ensemble ...protein structure to better accommodate known binders, it may also increase the ...
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Structure-based vaccines provide protection in a mouse model of ehrlichiosis.
... vaccines based on epitopes are more specific, safe, and easier to produce [24], and peptide vaccines based on the epitopes represent a potential strategy for the prevention and treatment of pathogenic ...
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Classification and structure-based inference of transcriptional regulatory proteins
... Protein domains are motifs or groups of motifs that have individual functions beside of the re- maining protein structures. Domains can be grouped according to their molecular function (ta- ble1.3). DNA-binding domains ...
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Engineering a light-controlled F1 ATPase using structure-based protein design
... Crystal structure of ATP synthase from Paracoccus denitrificans (Morales-Rios et ...Chemical structure of the crosslinker ABDM in the two isomerization states cis and trans (models created with the software ...
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Analysis of Curriculum Structure Based on LDA
... To find out if the actual topics covered by the developed course syllabi, we developed a method of systematically analyzing course syl- labi that uses latent Dirichlet allocation (LDA) a[r] ...
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CHARACTERIZATION OF THE POTIGUAR RIFT STRUCTURE BASED ON EULER DECONVOLUTION
... The behavior in subsurface of structural features can be investi- gated based on the Euler deconvolution for different depth inter- vals. In the Potiguar rift, the average dips of major edge faults are well ...
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Rev. Bras. Psiquiatr. vol.39 número4
... three-factor structure based on activity complexity (self-care, domestic, and complex activities) as the latent structure of ADL in our ...three-factor structure also met evi- dence of ...
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Computational drug discovery for the Zika virus
... 3D structure of proteins, and uses this information to probe interaction points between the protein and the ligand (Figure 2A) (Yang, ...protein structure: (i) The protein structure is complexed with ...
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Towards Domain Ontology Creation Based on a Taxonomy Structure in Computer Vision
... data structure facilitating the information ...to structure and represent the domain knowledge. This information structure can be used as a database of many geographic information systems (GIS) or ...
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eve cccavalcante the use
... We have proposed a new equalizer filter structure based on generalized orthonormal bases. We also have presented an experimental method for basis parameterizing[r] ...
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Bolema vol.30 número56
... competency- based approach to develop students’ mathematical competen- cy? Currently the problem has not completely been solved, because the distinctness, what basic principles of mathematics training are followed ...
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Wavelet packet transform based ECG signal filtering implemented in reconfigurable hardware structure
... MATLAB is a very useful tool for algorithm development, data analysis, a large number of the algorithms used today in digital signal processing originates as MATLAB models. Simulink is a graphical tool, which lets the ...
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GA Based Fixed Structure H-Infinite Loop Shaping Controller for a Buck-Boost Converter
... DC DC converters have been widely used in computer hardware and industrial applications. Controlling of these converters is a challenging field because of their intrinsic nature of nonlinear, time variant systems [1]. In ...
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Structure of nanoporous zirconia-based powders synthesized by different gel-combustion routes
... SAXS measurements were performed using the synchrotron D11A-SAXS1 beamline of LNLS, Campinas, Brazil. This beamline is equipped with an asymmetrically cut and horizontally bent Si(111) monochromator that provides a ...
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Accessibility of the Regional Information Based on the Regional Information Structure Framework
... The goal of the information and communication technologies development in rural areas should be to reach higher quality of life and sustainable development, but not only the implementation of ICT. Technologies provide ...
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Audiol., Commun. Res. vol.20 número4
... Purpose: To identify in the literature the use of psychometry in Speech Therapy, besides the processes used in the search for validity evidence for the instruments in that field. Research strategy: The databases ...
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Inferring human colonization history using a copying model.
... region based on the above parameters using msHOT, SNPs were randomly chosen to mimic allele frequencies present in the data of Conrad et al [12] in the following ...SNPs based on the ascertainment strategy ...
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