CONTENTS
Supplement 11
Volume 10
2009
BMC
Bioinformatics
Editor-in-Chief Melissa Norton, MD
Biology Editor Penny Webb, PhD
In-house Editor Tim Sands
BMC Bioinformatics
(www.biomedcentral.com/bmc bioinformatics) is an open access journal published by BioMed Central Ltd. The journal publishes original peer-reviewed research articles in all aspects of computational methods used in the analysis and annotation of sequences and structures, as well as all other areas of computational biology.
BMC Bioinformatics
(ISSN 1471-2105) is indexed/tracked/covered by PubMed, MEDLINE, BIOSIS, CAS, Scopus, EMBASE, Thomson Reuters (ISI) and Google Scholar.
Contact BioMed Central supplements@ biomedcentral.com
Proceedings of the Sixth Annual MCBIOS Conference.
Transformational Bioinformatics: Delivering Value from Genomes
Starkville, MS, USA
20-21 February 2009
Edited by Jonathan D Wren (Senior Editor), Yuriy Gusev, Raphael D Isokpehi,
Dan Berleant, Ulisses Braga-Neto, Dawn Wilkins and Susan Bridges
www.biomedcentral.com/1471-2105/10?issue=S11
S1 Proceedings of the 2009 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference
Jonathan D Wren et al.
S2 Facilitating functional annotation of chicken microarray data
Teresia J Buza et al.
S3 Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom
Zhanyou Xu et al.
S4 Threshold selection in gene co-expression networks using spectral graph theory techniques
Andy D Perkins and Michael A Langston
S5 HPD: an online integrated human pathway database enabling systems biology studies
Sudhir R Chowbina et al.
S6 Computational analysis of gene expression space associated with metastatic cancer
Andrey Ptitsyn
S7 Exploratory visual analysis of conserved domains on multiple sequence alignments
TJ Jankun-Kelly
S8 Structural and functional-annotation of an equine whole genome oligoarray
Lauren Brightet al.
S9 Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data
Bart HJ van den Berg
S10 Analysis and modeling of time-course gene-expression profiles from nanomaterial-exposed primary human epidermal keratinocytes
Amin Zollanvari et al.
S11 Site-specific impacts on gene expression and behavior in fathead minnows (Pimephales promelas) exposed in situto streams adjacent to sewage treatment plants
Natàlia Garcia-Reyero et al.
S12 Microarray platform consistency is revealed by biologically functional analysis of gene expression profiles
Zhiguang Li et al.
S13Automatic identification of angiogenesis in double stained images of liver tissue
Mutlu Mete et al.
S14 NATbox: a network analysis toolbox in R
Shweta S Chavan et al.
S15 Protein local 3D structure prediction by Super Granule Support Vector Machines (Super GSVM)
Bernard Chen and Matthew Johnson
S16 Novel software package for cross-platform transcriptome analysis (CPTRA)
Xin Zhou et al.
S17 An automated proteomic data analysis workflow for mass spectrometry
Ken Pendarvis et al.
S18 PathBinder–text empirics and automatic extraction of biomolecular interactions
Lifeng Zhang et al.
S19 Graph ranking for exploratory gene data analysis
Cuilan Gao et al.
S20 Integrating phenotype and gene expression data for predicting gene function
