h tt p : / / w w w . b j m i c r o b i o l . c o m . b r /
Environmental
Microbiology
Detection
of
carboxylesterase
and
esterase
activity
in
culturable
gut
bacterial
flora
isolated
from
diamondback
moth,
Plutella
xylostella
(Linnaeus),
from
India
and
its
possible
role
in
indoxacarb
degradation
Shanivarsanthe
Leelesh
Ramya,
Thiruvengadam
Venkatesan
∗,
Kottilingam
Srinivasa
Murthy,
Sushil
Kumar
Jalali,
Abraham
Verghese
ICAR-NationalBureauofAgriculturalInsectResources,Hebbal,Bangalore,Karnataka,India
a
r
t
i
c
l
e
i
n
f
o
Articlehistory: Received24June2014 Accepted8September2015 Availableonline2March2016 AssociateEditor:ValeriaMaiade Oliveira Keywords: Plutellaxylostella Bacteria 16SrRNA Phylogeny Carboxylesterase Indoxacarb
a
b
s
t
r
a
c
t
Diamondbackmoth(DBM),Plutellaxylostella(Linnaeus),isanotoriouspestofbrassicacrops worldwideandisresistanttoallgroupsofinsecticides.Theinsectsystemharborsdiverse groupsofmicrobiota,whichinturnhelpsinenzymaticdegradationofxenobiotic-like insec-ticides. The presentstudy aimed todetermine thediversity ofgutmicroflorain DBM, quantifyesteraseactivityandelucidatetheirpossibleroleindegradationofindoxacarb. Wescreened11geographicpopulationsofDBMinIndiaandanalyzedthemforbacterial diversity.Theculturablegutbacterialfloraunderwentmolecularcharacterizationwith16S rRNA.Weobtained25bacterialisolatesfromlarvae(n=13)andadults(n=12)ofDBM.In larvalgutisolates,gammaproteobacteriawasthemostabundant(76%),followedbybacilli (15.4%).Molecularcharacterizationplacedadultgutbacterialstrainsintothreemajorclasses basedonabundance:gammaproteobacteria(66%),bacilli(16.7%)andflavobacteria(16.7%). Esteraseactivityfrom19gutbacterialisolatesrangedfrom0.072to2.32mol/min/mg pro-tein.Esterasebandswereobservedin15bacterialstrainsandthebandingpatterndiffered inBacilluscereus–KC985225andPantoeaagglomerans–KC985229.Thebandswere character-izedascarboxylesterasewithprofenofosusedasaninhibitor.Minimalmediastudyshowed thatB.cereusdegradedindoxacarbupto20%,soitcoulduseindoxacarbformetabolism andgrowth.Furthermore,esteraseactivitywasgreaterwithminimalmediathancontrol media:1.87versus0.26mol/min/mgprotein.Apartfromtheinsectesterases,bacterial carboxylesterasemayaidinthedegradationofinsecticidesinDBM.
©2016SociedadeBrasileiradeMicrobiologia.PublishedbyElsevierEditoraLtda.Thisis anopenaccessarticleundertheCCBY-NC-NDlicense
(http://creativecommons.org/licenses/by-nc-nd/4.0/).
∗ Correspondingauthor.
E-mail:tvenkat12@gmail.com(T.Venkatesan).
http://dx.doi.org/10.1016/j.bjm.2016.01.012
1517-8382/©2016SociedadeBrasileiradeMicrobiologia.PublishedbyElsevierEditoraLtda.ThisisanopenaccessarticleundertheCC BY-NC-NDlicense(http://creativecommons.org/licenses/by-nc-nd/4.0/).
Introduction
Diamondbackmoth(DBM),Plutella xylostella(Linnaeus), isa seriousdestructivepestofcruciferouscropsworldwide.1The costassociatedwithitsmanagementisestimatedtobe4–5 USbillionperyear.2,3InIndia,DBMwasidentifiedasamajor pest,withreported lossesofup to50%.4 DBMhasbecome resistanttoeach newclassofinsecticidebecauseof inten-siveandrepeateduse ofinsecticides. Insecticideresistance andabsenceofnaturalenemiesarebelievedtoexplaintheP. xylostellapeststatusworldwide.3,5 Insectsgainresistanceto insecticidesbyincreasingproductionofmetabolicenzymes byesterases,glutathione-S-transferasesandP450-dependent monooxygenasesaswellasnon-metabolicmechanisms. Fur-thermore,anincreasednumberofbacteriaintheinsectgut mayproducedetoxifyingenzymessuchascarboxylesterase andhelpinthedetoxificationofthexenobioticcompounds. DBMpopulationswerefoundtoharbormanygutbacteria.6
In recent decades, numerous investigations have aimed to understand the metabolic roles of associated microorganisms,7,8 mainly bacteria, in gut microbiota.9–12 However, despite the growing awareness of the key roles microbesplayinmetabolism,vitaminsynthesis,pheromone production,pathogenpreventionandpesticidedegradation,13 thesymbiotic relationshipwithinthe gutisfar frombeing fullyunderstood.Microscopyexaminationofthecontentof thealimentarycanalofinsectsrevealsavarietyofmicroflora ranging from bacteria, yeast, molds and protozoa, but the interactionwithhostinsectsrangesfrommutualistic symbio-sistopathogenesis.Insectswithpoororrestrictednutrient dietlikelyhaveprimaryendosymbionts,andnoneofthese bacterialendosymbiontshavebeencultured.14
Degradationof insecticides usually combinesa number ofprocesses, includingmicrobial degradationandchemical hydrolysis,which is alsoaffected bysomephysiochemical propertiessuchaspH,organiccarbonandmoisturecontent.15 However,degradation istheprimarymechanismof insecti-cidebreakdown and detoxificationininsect systems; thus, microbesmayhaveamajorroleininsecticideresistance.A significantnumberofmicrobialcarboxylesteraseshavebeen discovered,16buttheroleofbacterialcarboxylesterasefrom insectsinthedegradationofinsecticidesislittleknown.
WeaimedtodeterminewhethergutmicrofloraofDBM lar-vaeplayaroleininsecticidedegradation.Wecharacterized andanalyzedthediversityofgutbacteriaoflarvaeandadults ofDBMpopulationsbybiochemical and culture-dependent 16SrRNA gene-basedmolecularmethods. Furthermore,we detectedgeneralesteraseandcarboxylesteraseactivityof bac-terialstrains byspectrophotometry and native PAGEassay, respectively,toexaminethepossibleroleoflarvalgutbacteria ininsecticidedegradation.
Materials
and
methods
CollectionofDBMpopulations
Larvaeandadultswerecollectedfromdifferentgeographical locationsofIndia(Table1S)andrearedonmustard(Brassica
juncia L.)seedlings in plasticcups (5.5cm×6.9cm×4.5cm) containingmoistenedvermiculate.Theindividualcupswere placedinplasticcages(24cm×24cm×24cm)foradult emer-gence.
Culture-dependentisolationofbacterialfloraandbacterial growth
Before dissection, 4th-instar larvae and 1-week-old DBM adultsweresurface-sterilizedinsodiumhypochlorite(0.1%) and ethanol(70%) for5s toremove the adhering contam-inants,especiallyexternal microflora.17 Theentiregut was removedunderasepticconditionsfromsterilizedlarvaeand adults.Guthomogenates(100L)wereplatedonsterile LB-agar media (10gtryptone, 5g yeast extract, 10gNaCl and 15gagar)inthreereplicatesandincubatedat30◦Cfor48h. Thecolonieswereselectedbymorphologicalcharacteristics (shape, color, and elevation) from the three replicates and byGramstaining,thenwerestreakedontoLBagarplatesto obtainpureculture,whichwasinoculatedonLBbroth(10g tryptone,5gyeastextract,10gNaCl)andincubatedat30◦C for48–72hformaximumgrowth.
Screeningandidentificationbasedonbiochemicaland morphologicalcharacteristics
Preliminaryidentificationofbacterialisolateswasbasedon biochemicalanalysis,morphologiccharacteristicsandGram staining.AllisolatesunderwentVoges–Proskauerandmethyl redtesting,withredindicatingpositivestainingandyellowor brownnegativestaining.
DNAextraction,PCRamplificationand16SrRNAgene sequenceanalysis
Culturable bacterial genomic DNA was isolated by SDS-lysis18 and the quantity of DNA was checked with 1% agarose gel. The 16S rRNA gene was amplified with the 16S primer (27F: AGAGTTTGATCMTGGCTCAG and 1492R: CGGTTACCTTGTTACGACTT).ThePCRprotocolwasaninitial denaturationat95◦Cfor1minfollowedby30cyclesof95◦C (1min),annealing55◦C(1min)and72◦C(2min)andafinal extensionstepof72◦Cfor2min(C1000Thermalcycler).The amplifiedPCRproductwasverifiedwith1.5%agarosegel.The PCRproductwaspurifiedbyuseoftheQuaginPCRpurification kit.Directsequencingofthe16SrRNAgeneforallbacterial iso-lateswasperformedatEurofinsanalyticalservices(Bangalore, India).
Phylogeneticsanalysis
TheNCBIdatabase(http://www.ncbi.nlm.nih.gov)wasBLAST searched for the 16S rRNA gene sequences, which were used to construct a phylogenetic tree by the character-basedmaximum-likelihoodmethodbasedontheTamura–Nei model19 withMEGA6and1000-iterationbootstrapping.The phylogenetictreewasvisualizedbyusingTreeView.Gamma distributionparametersandsubstitutionrateswereusedin phylogeneticanalysis.
Quantitativeanalysisofesteraseandproteinestimation
Bacterialculturesweretransferred(1mL)toEppendorftubes andcellsuspensionswerecentrifugedat8000rpmfor10min (4◦C).Pelletswerere-suspendedin100mMpotassium phos-phatebuffer(pH7.5)andDNaseandcentrifugedat8000rpm for 15min (4◦C). Esterase activity was determined spec-trophotometricallyat450nm.20Anamountof900Lreaction mixture[␣-naphthylacetate+fastblueRR (4-benzoylamino-2,5-dimethoxyaniline)]and4mLpotassiumphosphatebuffer was added to each 100L of enzyme extract. The initial spectrophotometricreadingwasat450nm.Themixturewas incubatedatroomtemperature(RT)for10minandabsorbance wasrecordedat450nm.Astandardcurvewaspreparedwith anidenticalprocedurewithaknownamountof␣-napthol. Therate of hydrolysis was expressed asmicromoles of ␣-naptholproducedperminuteatRTandthespecificactivity was expressed as micromoles of ␣-napthol produced per minutepermilligram proteinatRT.Theprotein concentra-tionofthesamplewasdeterminedbytheLowrymethod21 withbovineserumalbuminusedasastandard.
Quantificationofesteraseinbacterialfloraanddetection ofcarboxylesterase
Thecarboxylesteraseactivitypatternin25bacterialisolates wasdetermined in8%polyacrylamidegel(pH8.8)bya Bio-radminigelelectrophoresissystem.22 Esteraseactivitywas estimated in 20min at RT. Profenofos was used as a car-boxylesteraseinhibitorfordetection.23NativePAGEgelwith theenzymesamplewasincubatedinthePAGEbuffer contain-ing100Linhibitorsolutionfor30minatRTandthecontrol wasno treatment. Gelwas observedafterstainingwith ␣-naphthylacetate(0.4%)andFastBlueBsalt(0.1%)in40mM sodiumphosphatebuffer(pH7.4)andcomparedwiththe con-trolforcarboxylesterasedetection.
Screeningofindoxacarb(92.02%purity)degrading bacteria(BayerCropSciences,Mumbai,India)
Previouslyidentifiedlarvalgutbacterialstrainswerescreened fortheirabilitytodegradeindoxacarb.Thebacterialculture wasplatedonagarmediacontaining5mLindoxacarb(25,50 and100ppm).Thecoloniesabletogrowontheagarplatewith indoxacarbwereselectedandstreakedonanLBagarplateto obtainpureculture.Thisprocedurewasrepeatedthreetimes toensurethepurityoftheisolatedcolonies.Thepureculture wasinoculatedinLBbrothandincubatedat30◦Cfor48–72h formaximumgrowth.
IndoxacarbdegradationbyB.cereusandgas chromatography–massspectroscopy(GC–MS)
Aflask(250mL) wassupplementedwithindoxacarb asthe onlycarbonsource.Intotal,50mLminimalmediaand1mL inoculumweretransferredtotheflaskandthoroughly homog-enized.Thefinalconcentrationofindoxacarb(5mL)was25,50 and100ppm.Minimalmediawithinoculumandwith indox-acarbwithoutinoculumwasacontrol.ThepHofallmediawas adjustedto7.0andtheculturewasincubatedat37◦Cwithout
Table1–Culturablelarvalgutbacteriaisolatedfrom diamondbackmoth(DBM)populations.
Sampleno. Isolate Bacteria Accessionno.
1 PX-1 Enterococcusmundtii KC985227 2 PX-2 Bacilluscereus KC985225 3 PX-3 Enterobacterasburiae KC410777 4 PX-3 Leclerciaadecarboxylata KC410778 5 PX-3 Enterobacteriaceaebacterium KC410779 6 PX-4 Enterobactersp. KF468763 7 PX-5 Pseudomonassp. KF597541 8 PX-6 Bacilluscereus KC139357 9 PX-7 Pseudomonassp. KF485084 10 PX-8 Enterococcusmundtii KC985226 11 PX-9 Enterobactersp. KF485082 12 PX-10 Enterococcusmundtii KF597539 13 PX-11 Enterobactersp. KC441058
contactwiththeambientatmosphereandkeptinashakerat 120rpmfor6days.Cellgrowthwasmeasured spectrophoto-metricallybymeasuringabsorbanceat660nm.Growthrate wasestimatedbytheslopeofthelinerepresentingthe lin-ear fitofthe increase inabsorbance over time,during the exponentialphaseofculturegrowth.
The culture was extracted twice with anequal volume ofethylacetateasanextracting reagent.Themixturewas centrifuged at 8000rpm for 10min and ethylacetate with residualindoxacarbwasfiltered.Thefiltratewasevaporated to drynessand re-dissolved in50Lhigh-performance liq-uid chromatography-gradedichloromethaneforanalysisby GC–MS.Theoperatingconditionswereinjectortemperature 245◦C,detectortemperature280◦Candcarrierflow2mL/min. Minimal media and indoxacarb without bacteria and with inoculumandwithoutindoxacarbwerecontrols.
Quantificationofesteraseduringindoxacarbdegradation
byB.cereus
Thetestsample(minimalmedia+indoxacarb+B.cereus)and controlsample(minimalmedia+B.cereus)wereassayedfor esterase activity.Thetestsamplewascentrifuged topellet outthecells(8000rpm,4◦C,and15min).Esteraseactivitywas determinedasdescribedabove.
Results
Biochemicalcharacteristics,morphologicalcharacteristics
andGramstainingpropertiesoflarvalandadultgut
bacterialisolatesofDBM
Analysisofmorphologicalcharacteristicsrevealedthesame typeofbacterialcoloniesinallthreereplicates.Therefore,a singlecolonywasselectedtomaintainapureculture.Among the13larvalisolates,9wereGram-negativerods,2were Gram-positiverodsandtheremaining2wereGram-positivecocci. Among12 adultisolates,9were Gram-negativerodsand3 wereGram-positiverods.Among25bacterialstrains,21had negative resultson methyl red testing,and 4 had positive results.Voges–Proskauertestingwaspositivefor12isolates andnegativefor13(Tables2Sand3S).Forfurtherconfirmation
Table2–CulturableadultgutbacteriaisolatedfromDBM populations.
Sampleno. Isolates Bacteria Accessionno. 1 PX-1 Chryseobacteriumsp. KF312303 2 PX-2 Chryseobacteriumsp. KC985228 3 PX-3 Enterobactersp. KC512248 4 PX-4 Enterobactersp. KF468764 5 PX-5 Enterococcusmundtii KC512247 6 PX-6 Bacilluscereus KC139358 7 PX-6 Weissellaconfusa KC139359 8 PX-7 Pseudomonassp. KF597543 9 PX-8 Pantoeaagglomerans KC985229 10 PX-9 Morganellamorganii KF468765 11 PX-10 Pseudomonassp. KF597542 12 PX-11 Pseudomonasaeruginosa KF485083
andidentificationofisolates,molecularcharacterizationwas performed.
Diversityanalysisofculturablebacteria
Intotal,13and12bacterialfromlarvaeisolates(Table1)and adults(Table2),respectively,wereidentifiedandsequenced. 16S rRNA sequencing placed these 13 larval bacterial iso-latesintotwomajorclasses–gammaproteobacteria(76%)and
bacilli (15.4%)andthe 12adultbacterialisolatesinto three major classes basedon abundance– gammaproteobacteria (66%),bacilli(16.7%)andflavobacteria(16.7%).
Molecularcharacterizationandphylogenyanalysis
Thephylogenyanalysisof16SrRNAgenefromlarval(Fig.1) and adult(Fig.2)bacterialisolatesshowed twoclades. 16S rRNA gene sequencingwas usedto determinebroad taxo-nomicgroupings;thepercentagedistributionisinFig.3.For larvalgutisolates,thephylogenetictreeshowedtwoclades with94%bootstrapvalue:clade1,Enterococcus,Bacillus, Pseu-domonasandEnterobacter,andclade2,Enterobacterasburiaeand Enterobactersp.Furthermore,thefirstcladewasdividedinto twobranches:branch1,EnterococcusmundtiiandB.cereus,and branch2,PseudomonasandEnterobacter.Inthesecondbranch, Pseudomonasshowed98%similarity,Enterobactersp.and Entero-bacteriaceaebacteriumwerecloselyrelated,andthetreewas rootedwithCrenarchaeota.
Thephylogenetictreeforadultsshowedtwoclades:clade 1, Pseudomonas, Enterococcus, Weissella, Pantoea, Enterobacter, Morganella and Bacillus, and clade 2, Chryseobacterium. The firstcladewasfurtherdividedintotwobranches;inthefirst branch,Pseudomonassp.andP.aeruginosawererelatedtoeach
Enterococcus mundtii NBRC 12367 (AB680277) Enterococcus mundtii qz963 (AB761305) Enterococcus mundtii PX-E.C (KC985226) *
Enterobacter sp PX-L-B.E.c (KF468763) * Enterobacter sp. Hauzhou07 (JX220913) Enterobacter sp. PXE-1 (KC441058)*
Enterobacter asburiae m-4 (KF757336) Enterobacter asburiae PXE (KC410777) *
Enterobacter sp PX-L-S.E.sp (KF485082) * Enterobacter sp BSP6 (KF360068). 0.1 91 85 99 87 82 75 94 98 85 88 85 82 92 Crenarchaeota CQ786528 Enterobacteriaceae bacterium PXS (KC410779) * Enterobacteriaceae bacterium B28 (FJ628394) Bacillus cereus PXD (KC139357) *
Bacillus cereus PX-B.c.Or (KC985225) * Pseudomonas sp PX-L-Y.P.sp (KF485084) * Pseudomonas sp PX-L-P.strt (KF597541) * Pseudomonas sp ME-1 (KF975434) Pseudomonas sp SNPO614 (KF851246) Bacillus cereus CSB17 (KC999982) Bacillus cereus JKR62 (HQ705975) Bacillus cereus JP44SK43 (JX155760)
Enterococcus mundtii PX-L-Em (KF597539) * Enterococcus mundtii PX_Ec.Mt.Pun (KC985227) * Enterococcus mundtii APU IK-3 (AB898301)
Enterococcus mundtii APU IK-12 (AB898308)
Fig.1–Maximum-likelihoodtreededucedfrompartialsequencesof16SrRNAgeneoflarvalgutbacterialisolatesofDBM. Entriesfromthisworkarerepresentedwithastar(*),accessionnumbersandphylotypes.Entriesfromthepublicdatabase arerepresentedbyagenericnameandaccessionnumbers.Crenarchaeotawasusedasanoutgroup.
Pseudomonas sp PX-A-P.st (KF597542)* Pseudomonas sp ME-1 (KF975434)
Pseudomonas sp EGY-WPhB6 (KF576651) Pseudomonas sp PX-A-P.p (KF597543)*
Pseudomonas aeruginosa PX-A-D.P.a (KF485083)* Pseudomonas aeruginosa BM6 (JX14417)
Bacilllus cereus PXDK-2 (KC139358)* Bacilllus cereus 3170O2 (KF598976)
Morganella morganii PX-A.S.M.m (KF468765)*
Morganella morganii 3D4A (JF710989) Pantoea agglomerans PX-Pt.ag.jor (KC985229)* Pantoea agglomerans WAB1951 (AM184290) Enterobacter sp PX-A-E.cl (KC512248)* Enterobacter sp R9 (KF843699) Enterobacter sp Px-A-Mi (KF468764)*
Enterobacter sp AL (KF747680) Enterobacter sp yingde07 (JX220911)
Enterococcus mundtii PX-A-Ec.m (KC512247)* Enterococcus mundtii APUIK-47(AB898343) Weissella confusa PXDK-3 (KC139359)*
Weissella confusa PUFSTMId055 (KR780676.1)
Chryseobacterium sp PX-A-PUJ-Cry.sp (KF312303)* Chryseobacterium sp K2 (KM192326) Chryseobacterium sp PX-Cry.bt.sp.Ori (KC985228)* Chryseobacterium sp JAS14 (KF313552) Crenarchaeota SCGC ASPO01000004 98 89 63 64 79 68 40 34 70 60 92 2720 99 98 8 81 81 0.5
Fig.2–Maximum-likelihoodtreeconstructedforpartial16SrRNAgeneofadultgutbacterialisolatesofDBM.Entriesfrom thisworkarerepresentedwithastar(*),accessionnumbersandphylotypes.Entriesfromthepublicdatabaseare
representedbyagenericnameandaccessionnumbers.Crenarchaeotawasusedasanoutgroup.
otherwith99%similarity.Enterobactersp.wasclosetoPantoea agglomerans.ThetreewasrootedwithCrenarchaeota. Entero-bacter,Enterococcus, Pseudomonasand Bacilluswere the most commoninbothlarvalandadultisolates.
0 20 Flavobacteria 40 60 80 100 120 140 160 Gammaproteobacteria Bacilli
Adult Larvae
Fig.3–Percentagedistributionofadultandlarvalgut isolatesofDBM.Percentagedistributioncalculatedonthe basisofrelativeabundance.
Esteraseanalysis
In total, 19 of 25 strains showed esterase activity, which ranged from 0.072 to 2.32mol/min/mg protein (Fig. 4). B. cereus (KC985225) showed high esterase activity. Esterase activity was observed in 15 of 25 bacterial strains: E. mundtii–KC985227,KF597539,KC512247,KC985226;B.cereus – KC985225, KC139358; E. asburiae – KC410777, Enterobacter sp. – KF485082; Enterobacter sp.– KC512248; E. cancerogenus – KF468763; P. agglomerans – KC985229; Pseudomonas sp. – KF597541,KF597542;Morganellamorganii–KF468765and Chry-seobacteriumsp.–KC985228.Theesterasebandpatternsofthe strainsandthefrequenciesofeachesterasebandareinFig.5. Fouresterasebandsweredetected,namelyEst-1,Est-2,Est-3 andEst-4,wasaccordingtotheirrelativemobilityinthegel. Est-2andEst-4werecommonamongall15strains,whereas Est-3wasobservedinP.agglomerans–KC985229andEst-1inB. cereus–KC985225.Thebandswerescatteredthroughoutthree zonesofthegel:fast-moving(Est-1),medium-moving(Est-2 and Est-3)andslow-moving(Est-4).Allhydrolyzedthe sub-strate␣-naphthylacetateandwereclassifiedas␣-esterases.
0 0.5
Enterococcus mundtii (KF597539) Enterobacter asburiae (KC410777) Enterobacter sp. (KF485082)
Pantoea agglomerans (KC985229)Pseudomonas stutzeri (KF597541)Pseudomonas stutzeri (KF597542)Morganella morganii (KF468765)Chryseobacterium sp (KC985228) Bacillus cereus (KC139357)Enterobacter sp (KC441058)
Enterococcus mundtii (KC985227) Enterobacter cloacae (KC512248)
Enterobacter cancerogenus (KF468763) Enterococcus mundtii (KC512247)Enterococcus mundtii (KC985226)
Bacillus cereus (KC985225)Bacillus cereus (KC139358)
1 1.5 2 2.5 Esterase activity µ moles/min/mg protein Bacterial isolates
Fig.4–SpecificactivityofbacterialesteraseisolatedfromlarvalandadultgutofDBM.
1 2 3 4 5 6 7 8 9 10 11 12 EST-4 EST-3 EST-2 EST-1 13 14 15
Fig.5–EsteraseisozymepatternfrombacterialisolatesofDBM.
Detectionofcarboxylesterase
The bands inhibited by profenofos were classified as car-boxylesterases.Incubationofthegelinprofenofoscompletely inhibitedEst-2inallbacterialstrains,Est-4inallstrainsexcept P.agglomerans–KC985229andEst-1inB.cereus–KC985225, whereasEst-3andEst-4werenotinhibitedbyprofenofosinP. agglomerans–KC985229.Accordingtothisclassification, Est-2,Est-3andEst-4intheremainingstrainswerefoundtobe carboxylesterase.
Screeningofindoxacarb-degradingbacteria
Of13larvalgutbacterialisolates,onlyB.cereus–KC985225 was able togrow in the agar medium containing100ppm indoxacarb.B.cereus grownon minimalmedia lacking car-bon and supplementedwith indoxacarb showed enhanced growthrate,at660nm,whereasB.cereusgrownonminimal mediawithoutindoxacarb showedretardedgrowth (Fig. 6), whichconfirmsthatgrowthwaslimitedbydepletionof indox-acarbasanavailablecarbon source.Themaximumgrowth wasobservedinmediumsupplementedwith100ppm indox-acarb. 0 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0 24 48 72 96 120 Ab so rbance at 66 0n m Incubation time (h) 25 50 100 C
Quantificationofesteraseactivityduringindoxacarb degradationbyB.cereus
The esterase activity in the test sample (minimal media+indoxacarb+B. cereus) was 1.87, 0.46 and 0.35mol/min/mg protein for 100, 50 and 25ppm respec-tively,andthesameinthecontrol(minimalmedia+B.cereus) was0.26mol/min/mgprotein(Fig.7).
GC–MSanalysis
The sample with B. cereus+indoxacarb+minimal media showed a single peak at retention time 22.9min in the chromatogram,and MSanalysisdetermined thatit had an identicalspectrumofindoxacarb(Fig.8).Thesamespectrum ofindoxacarbwasobservedatretentiontime22.86minwhen analyzingthecontrolsamplewithoutB.cereus(Fig.9),butthe totalareaoftheindoxacarb(Fig.10)peakwasreducedinthe
0 0.5 1 1.5 2 Indoxacarb (100 ppm) Indoxacarb (50ppm) Indoxacarb concentration (ppm) Esterase activity µ moles/min/mg protein Indoxacarb (25 ppm) Control
Fig.7–QuantificationofesterasesfromBacilluscereusin minimalmediawithindoxacarb.
2.8e+07 TIC: 30-1-14-STD.D\data.ms Abundance AbundanceTime--> 59.0 150.0 218.0 264.0 177.0 114.0 88.0 31.0 m/z--> 240.0 289.0 321.1 343.0 366.0 392.0 424.1 468.1 499.1 549.2 527.1 4.798 7.787 11.643 22.863 2.6e+07 2.4e+07 2.2e+07 1.8e+07 1.6e+07 1.4e+07 1.2e+07 1e+07 8000000 6000000 4000000 2000000 1000000 900 000 800 000 700 000 600 000 500 000 400 000 300 000 200 000 100 000 20 40 60 80 100120140160180200220240260280300320340360380400420440460480500520540560 Indoxacarb 0 6.00 8.00 10.00 12.00 14.00
Scan 2896 (22.826 min) 30-1-14-STD.D\data.ms
16.00 18.00 20.00 22.00 24.00 26.00 28.00 2e+07
Abundance 22.901 300 250 200 150 100 50 7000 6500 5500 4500 3500 2500 1500 500 0 20 6000 5000 4000 3000 2000 1000 0 6.00 8.00 10.00 12.00 14.00 16.00 18.00 20.00 22.00 24.00 26.00 28.00 40 60 80 100 120 140 160180 200220240260 280300 320340 360380400 420 440460 480500520540 Indoxacarb m/z--> Abundance Time--> 207.0 32.0 59.0 95.9 150.0 122.8 176.9 235.0 281.0 320.9 355.1 429.0 401.0 475.0 527.0
Scan 2906 (22.891 min) 25-1-14-4B.D\data.ms lon 527.00 (526.70 to 527.00): 25-1-14-4B.D\data.ms
Fig.9–ChromatogramandmassspectrumofindoxacarbdegradationbyB.cereusintestsample.
O Cl O O O F F F O O O N N N
Fig.10–Structureofindoxacarb.
testsample.B.cereusshowedpartialdegradationofindoxacarb (20%).
Discussion
Inthepresentstudy,weisolatedvariousbacteriaassociated withdifferentfieldpopulationsofDBM,whichledtothe iden-tificationof13culturableisolatesfromlarvaegutand12from adultgut.WefoundE.mundtii,B.cereus,E.asburiae,Enterobacter sp.,Pseudomonassp.,P.aeruginosaandBacillussp.asthemajor bacterialisolatesfromlarvalandadultgut.Bacillussp., Pseu-domonassp.hasbeenisolatedfromthegutoftheDiscladispa armigera(Olivier).24ThePseudomonassp.andStenotrophomonas
sp.were reportedinthe larval gutofDBM.6 PresenceofP. aeruginosa,Pseudomonassp.andEnterococcussp.wasreported inthelarvalgutofH.armigera.25Therefore,Bacillussp., Psue-domonasandEnterobacteroccurcommonlyindifferentgroups ofinsects.
Atthegenuslevel, Enterobacter(38.46%)and Pseudomonas (25%)dominatedinlarvalandadultDBMgut,respectively.The adultgutshowedmorediversebacterialcommunitiesas com-paredwithlarvae.Thegutduringthelarvaetoadulttransition isbelievedtoundergoasterilizationprocessandadultsrecruit newmicrobiota.26B.cereuswasexclusivelyretainedbyboth larvaeandadultsinthePX-6strain.Thedifferencesinmidgut bacterialcompositionbetweenlarvaeandadultswere large andcouldbeduetodifferentfoodhabitsandenvironmental conditions.Here,thelarvalgutbacterialassociationsaremore importantbecausetheyinvolvedetoxificationofinsecticide andmayconferresistancetoDBM.
BacteriaassociatedwithLepidopteraarelittleknown,and studies related togut microbiota suggest that microorgan-ismsplayaroleinhostdigestion,provideessentialnutrients andhelpindetoxificationofpesticides.27Microorganismsare knowntometabolize severalinsecticides. Insecticides with aliphatic,aromaticand heterocycliccompounds were com-pletelymineralizedbyvariousmicrobes.Catabolismisatype ofdegradation whereby an organic chemical iscompletely degraded, and the energy or nutrient gained used for the cellgrowthandco-metabolismisanothermethodof degra-dationwithnonetbenefittotheorganism.28 Threeclasses ofbacterialenzymesareknowntodegradeorganophosphate compounds,namely,phosphotriesterases(EC3.1.8.1),methyl parathion hydrolases (MPH, EC 3.1.8.1) and organophos-phorus acidanhydrolases (EC3.1.8.2).29 Ourstudy revealed esteraseinthegutbacteriaofDBMlarvae.Theroleofinsect gut bacterial esterases in degradation of insecticides has not been studied extensively; however, the role played by soilbacterialesterases ininsecticide degradation hasbeen reported.30
Native PAGE is animportant technique in the study of bacterialesterases.Thecharacteristicsofeachesterase isoen-zyme can be determined by the use of specific inhibitors. Carboxylesterases (EC 3.1.1.1) from the thermophillic bac-terium Alicyclobacillus tengchongensis completely degraded malathion.31Inourstudy,esterases(EC3.1.1)fromB.cereus degradedindoxacarbupto20%.Fromthepreliminary char-acterization of insect esterases from DBM, a high level of resistancewasfoundassociatedwithslow-movingesterases, whicharemoreimportantinresistancemonitoringthan fast-movingesterases.32Inthepresentstudy,among25bacterial strainstested,15showedesterasebands,whereas19showed esteraseactivitywhenquantifiedspectrophotometrically.All 15 strains showed slow-moving esterase and were charac-terizedascarboxylesterases,exceptinonestrain.Therefore, thepresenceofslow-movingcarboxylesteraseinthe bacte-rialstrainsmayplayaroleininsecticidedetoxificationand mayconferresistancetoDBM.Studiesoftheuseof micro-bialcarboxylesteraseforinsecticidedegradationarelimited. Indoxacarbisoneofthemostcommonlyusedinsecticides belongingtotheoxadiazinegroupworldwideanduntilnow, welackpublishedinformationon microbialdegradation of indoxacarb. Our study reveals that bacteria (B. cereus) in
DBM could utilizeindoxacarb for metabolism and growth. GC–MSanalysisoftheextractsoftheminimalmediastudy withB.cereusrevealeditsindoxacarb-degradingcapability.B. cereuswasalsofoundtodegradefenvalerate,cypermethrin, andchlorpyrifosinsoil.30,33,34Inthepresentstudy,B.cereus mayhavedegradedindoxacarbbyenhancedesterase activ-ity. Quantificationofesteraseintheminimalmediaclearly showed the role of esterase in degradation ofindoxacarb. From the resultsof this study,we cannotpredict whether this hydrolysis resultsincomplete mineralization or if the resultingmetaboliteremainsinthemedium.Bacteriaisolated fromtheinsectgutexposedtoinsecticidesgenerateenzymes, therebyresultinginanewmetabolicpathwayofinsecticide degradation.Our studyrevealed the role ofesterase inthe partialdegradationofindoxacarb.Wehaveinsufficient evi-dencetostatethesymbioticroleofthesebacteriawithDBM. Thepresentresultsopenanavenuefortheidentificationof novelenzymecarboxylesteraseanditsroleinthedegradation ofindoxacarb.Furthermore,intensiveworkonunderstanding thepathwaysandaminoacidsinvolvedmayleadtothe syn-thesisofspecificinsecticideswithanewmodeofactionfor themanagementofDBM.
Conclusions
Weisolated13and12bacterialisolatesfromlarvalandadult gutofDBM,respectively.Thegutbacterialassociationdiffered betweenadultsandlarvae.Inlarvalgutisolates, gammapro-teobacteriawasthemostabundant(76%),followedbyBacilli (15.4%).Esterasebandswereincreasedin15bacterialstrains. B.cereusdegradedindoxacarbupto20%,whichshowedits abil-itytoutilizeindoxacarbformetabolismandgrowth.Besides theinsectesterases,bacterialcarboxylesterasemayaidinthe degradationofinsecticidesinDBM.
Conflicts
of
interest
Theauthorsdeclarenoconflictsofinterest.
Acknowledgement
ThisisapartofPh.D.workofthefirstauthor.
Appendix
A.
Supplementary
data
Supplementarydataassociatedwiththisarticlecanbefound, intheonlineversion,atdoi:10.1016/j.bjm.2016.01.012.
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s
1.SheltonAM.Themanagementofdiamondbackmothand
othercruciferpests.In:ProceedingsoftheFourthInternational
WorkshoponDiamondbackMoth.2004:3–8.
2.ZaluckiMP,ShabbirA,SilvaR,AdamsonD,Shu-ShengL.
Estimatingtheeconomiccostofoneoftheworld’smajor
howlongisapieceofstring?JEconEntomol.2012;105: 1115–1129.
3. FurlongMJ,WrightDJ,DosdallLM.Diamondbackmoth
ecologyandmanagement:problems,progressand
prospects.AnnuRevEntomol.2013;58:517–541.
4. SandurS.Implicationsofdiamondbackmothcontrolfor
Indianfarmers.In:ConsultantReportfortheCentrefor
EnvironmentalStressandAdaptationResearch.Australia:La
TrobeUniversity,Victoria;2004:31.
5. TalekarNS,SheltonAM.Biologyecologyandmanagementof
thediamondbackmoth.AnnuRevEntomol.1993;38:275–301.
6. IndiraghandhiP,AnandhamR,MadhaiyanM,PoonguzhaliS,
LimGH,SaravananVS.Cultivablebacteriaassociatedwith
larvalgutofprothiofos-resistant,prothiofossusceptibleand
fieldcaughtpopulationsofdiamondbackmoth,Plutella
xylostellaandtheirpotentialforanatagonismtowards
entomopathogenicfungiandhostinsectnutrition.JAppl
Microbiol.2007;103:2664–2675.
7. DouglasAE.Themicrobialdimensionininsectnutritional
ecology.FunctEcol.2009;23:38–47.
8. MoranNA.AcceleratedevolutionandMuller’srachetin
endosymbioticbacteria.ProcNatlAcadSciUSA.
2007;93:2873–2878.
9. DillonRJ,DillonVM.Thegutmicrobiotaofinsects:
nonpathogenicinteractions.AnnuRevEntomol.2003;49:71–92.
10.NicholsonJK,HolmesE,KinrossJ,etal.Host–gutmicrobiota
metabolicinteractions.Science.2012;336:1262–1267.
11.RyuJH,KimSH,LeeHY,etal.Innateimmunehomeostasis
bythehomeoboxgenecaudalandcommensal-gut
mutualisminDrosophila.Science.2008;319:777–782.
12.StorelliG,DefayeA,ErkosarB,HolsP,RoyetJ,LeulierF.
LactobacillusplantarumpromotesDrosophilasystemicgrowth
bymodulatinghormonalsignalsthroughTOR-dependent
nutrientsensing.CellMetab.2011;14:403–414.
13.DillonRJ,DillonVM.Thegutbacteriaofinsects:
nonpathogenicinteractions.AnnuRevEntomol.2004;49:71–92.
14.FrederickBA,CaesarAJ.Analysisofbacterialcommunities
associatedwithinsectbiologicalcontrolagentsusing
moleculartechniques.In:SpencerNR,ed.ProceedingsoftheX
InternationalSymposiumonBiologicalControlofWeeds.
Montana,USA:MontanaStateUniversity,Bozeman;
2000:261–267.
15.GuntherAF.Residuesofpesticidesandothercontaminants
inthetotalenvironment.ResidueRev.1974:51.
16.BomscheurTU.Microbialcarboxylesterases:classification,
propertiesandapplicationinbiocatalysis.FEMSMicrobiol
Rev.2006;26:73–81.
17.GebbardiK,SchimanaJ,MullerJ,KrantalP,ZeeckA,VaterI.
Screeningforbiologicallyactivemetaboliteswith
endosymbioticbacilliisolatedfromarthropods.FEMS
MicrobiolLett.2001;217:199–205.
18.SynCK,SwarupS.Ascalableprotocolfortheisolationof
large-sizedgenomicDNAwithinanhourfromseveral
bacteria.AnalBiochem.2000;278:86–90.
19.TamuraK,NeiM.Estimationofthenumberofnucleotide
substitutionsinthecontrolregionofmitochondrialDNAin
humansandchimpanzees.MolBiolEvol.1993;10:512–526.
20.MillerRB,KaranRC.Arapidspectrophotometricmethodfor
thedeterminationofesteraseactivity.JBiochemBiophys
Methods.1980;3:345–354.
21.LowryOH,RosebroughNJ,FarrAL,RandallRJ.Protein
measurementwithFolinphenolreagent.JBiolChem.
1951;93:265–275.
22.Sousa-PolezziRD,BicudoH.Geneticvariationalongtimeina
BrazilianpopulationofAedesaegypti(Diptera:Culicidae)
detectedbychangesintheesterasepatterns.Genetica.
2005;125:43–53.
23.EmanMR.Esteraseactivityanddetectionof
carboxylesteraseandphosphotriesteraseinfemaledesert
locustSchistocercagregaria(Forskal)inrelationtotissuesand
ages.EgyptAcadJBiolSci.2008;1:135–143.
24.ThakurD,BhuyanM,MajumdarS,etal.Isolation,
characterization,in-vitroantibioticsusceptibilityand
pesticidetoleranceofgutbacteriafromricehispa,Dicladispa
armigea(Olivier).IndianJMicrobiol.2005;45:217–221.
25.MadhusudanS,JalaliSK,VenkatesanT,LalithaY,
PrasannasrinivasR.16SrRNAgenebasedidentificationof
gutbacteriafromlaboratoryandwildlarvaeofHelicoverpa
armigera(Lepidoptera:Noctuidae)fromtomatofarm.The Bioscan.2011;6:175–183.
26.AshaR,AnilS,RamanR,TridibeshA,RajKB.Bacterial
diversityanalysisoflarvaeandadultmidgutmicroflora
usingculture-dependentandculture-independentmethods
inlab-rearedandfield-collectedAnophelesstephensi–an
Asianmalarialvector.BMCMicrobiol.2009;9:96.
27.BroderickNA,RaffaKF,GoodmanRM,HandelsmanJ.Census
ofbacterialcommunityofgypsymothlarvalmidgutby
usingculturingandcultureindependentmethods.Appl
EnvironMicrobiol.2004;70:290–300.
28.RackeKD.Environmentalfateofchlorpyrifos.RevEnviron
ContamToxicol.1993;131:1–151.
29.MunneckeDM,HsiehDP.Pathwaysofmicrobialmetabolism
ofparathion.ApplEnvironMicrobiol.1976;31:63–69.
30.SelvamA,GnanaD,ThatheyuAJ,VidhyaR.Biodegradation
ofthesyntheticpyrethroid,fenvaleratebyBacilluscereus
Mtcc1305.WorldJEnvironEng.2013;2:21–26.
31.ZhenrongX,BoX,JunmeiD,LingyunL,JunjunL,ZunxiH.
Heterologousexpressionandcharacterizationofa
malathion-hydrolysingcarboxylesterasefroma
thermophilicbacterium,Alicyclobacillustengchongensis.
BiotechnolLett.2013;35:1283–1289.
32.MaaWC,LeeS,GuhSH,WangCM,HouJW.Esterase
zymogramsasanassayfordetectionofpopulationof
diamondbackmoth.In:TalekarNS,ed.Proceedingsofthe2nd
InternationalWorkshop.Shanhua,Taiwan:AsianVegetable
ResearchandDevelopmentCenter;1990.
33.ShaohuaC,JianjunL,MeiyingL,PengG,HuashengH.
Enhancementofcypermethrindegradationbyaco-culture
ofBacilluscereusZH-3andStreptomycesaureusHP-S-01.
BioresourceTechnol.2012;110:97–104.
34.ZhiyuanL,XinC,YiS,ZhenC.Bacterialdegradationof
chloropyrifosbyBacilluscereus.AdvMaterRes.2012: