haplotype analysis
Host genetic factors and vaccine-induced immunity to HBV infection: haplotype analysis.
... the haplotype least significantly associated in the unrelated, family or combined ...individual haplotype is calculated based on a score statistic for the effect of a given haplotype relative to all ...
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RET variants and haplotype analysis in a cohort of Czech patients with Hirschsprung disease.
... SNP analysis revealed significant differences in frequencies of 11 polymorphic RET variants between 162 HSCR patients and 205 unaffected ...in haplotype and diplotype analysis in the Czech ...
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Einstein (São Paulo) vol.15 número4
... the haplotype analysis, we observed a trend to significance for the haplotype CCGGC, patients with this combination would show a protection for the development of disc ...
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Candidate gene sequencing of SLC11A2 and TMPRSS6 in a family with severe anaemia: common SNPs, rare haplotypes, no causative mutation.
... other haplotype combinations could be concluded from ...specific haplotype combinations, which were present in the family ...specific haplotype-pairs in TMPRSS6 and SLC11A2, and for the combination ...
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Unexpected pattern of beta-globin mutations in beta-thalassaemia patients from northern Portugal
... Haplotype analysis. Determination of the b-globin haplo- types associated with the b-thalassaemia mutations was done by PCR-RFLP. DNA preparation and PCR reactions were performed as above, using the primers ...
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Whole Genome Sequence of Multiple Myeloma-Prone C57BL/KaLwRij Mouse Strain Suggests the Origin of Disease Involves Multiple Cell Types.
... mouse haplotype analysis, human MM SNP array data, and whole exome and whole genome sequencing of KaLwRij mice, we identified novel KaLwRij gene variants, including deletion of Samsn1 and deleterious point ...
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Haplotypes of the D-Amino Acid Oxidase Gene Are Significantly Associated with Schizophrenia and Its Neurocognitive Deficits.
... the haplotype analysis of this haplotype ...in haplotype distribu- tion between patient and control groups both in the original sample and in the replicated sam- ple (global p < ...The ...
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Quantitative trait loci (QTL) study identifies novel genomic regions associated to Chiari-like malformation in Griffon Bruxellois dogs.
... Haplotype analysis of the significantly associated QTL To better assess the association of the 2 SNP clusters identified in the mixed linear model, a multi-marker approach seemed in ...by haplotype ...
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Phylogeography and post-glacial recolonization in wolverines (Gulo gulo) from across their circumpolar distribution.
... An analysis of molecular variance (AMOVA) was used to quantify genetic variability among groups of populations, as well as within and among populations [70], in ARLEQUIN for 10 100 ...spatial analysis of ...
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Financial Performance Analysis Of Financial Service Cooperative
... Abstract: This research is aimed to test and identify empirical evidence regarding the effect of capital structure and loan to financial performance of cooperative, where the relationship between loan and financial ...
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Nucleotide polymorphisms and haplotype diversity of RTCS gene in China elite maize inbred lines.
... and haplotype diversity were ...proteins. Analysis of the polymorphism sites revealed that at least 6 recombination events have ...selection analysis also revealed that only this group was under ...
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High Expression of HMOX1 in Blue-Shelled Chickens is Associated with a TG Haplotype
... oxygenase (HO) is the rate-limiting enzyme (Maines, 1997). Previous studies have found that HO-1 (one of three HO isozymes) have a higher level of expression in shell the gland of BlueH than BrownH (Wang et al., 2010; ...
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Genetic variations and haplotype diversity of the UGT1 gene cluster in the Chinese population.
... In addition to the UGT1 diversity generated by alternative splicing, UGT1 genetic diversity, such as single nucleotide polymorphisms (SNPs), also affects their enzymatic activities [15]. Some UGT1A1 SNPs have been ...
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Genetic relationships of brook lamprey of the genus Lampetra in a Pyrenean stream in Spain
... tion analysis, in a multidimensional scaling analysis and in the analysis of the haplotype network (which differs from the present one only in the presence of the Spanish hap- lotype), ...
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Haplotype reconstruction error as a classical misclassification problem: introducing sensitivity and specificity as error measures.
... large as when a die was rolled for haplotype assignment of ambiguous subjects. This is due to the fact that then the haploptype inference is guided by neither the correlation nor the haplotype frequency. ...
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Haplotype phasing and inheritance of copy number variants in nuclear families.
... the haplotype distribution in a family by look- ing at the allelic composition (SNP and CNV genotypes) of all family members and testing through all possible allelic combinations for each studied CNV ...
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Computational Intelligence for Life Sciences
... Solving the Minimum Error Correction (MEC) problem is one of the most successful approaches belonging to the second class, allowing to obtain haplotypes characterized by a low percentage of SNPs erroneously assigned. MEC ...
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Genetic relationships among native americans based on β-globin gene cluster haplotype frequencies
... populations. Haplotype 2 (+ - - - -) was the most common in all groups studied, with frequencies varying from 70% to 100%, followed by haplotype 6 (- + + - +), with frequencies between 7% and ...predominant ...
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Rev. Bras. Hematol. Hemoter. vol.37 número2
... There is a clear predominance of the CAR haplotype (64.8%), compared to BEN (22.1%), ATP (12.3%) and CAM (0.8%). Findings are similar to those described in different regions of Brazil. In Ribeirão Preto (SP) there ...
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Annexin A5 Promoter Haplotype M2 Is Not a Risk Factor for Recurrent Pregnancy Loss in Northern Europe.
... M2 haplotype was detected at lower prevalence in Estonian RPL patients com- pared to fertile women ...M2 haplotype prevalence determined for the controls in this study and in the report by Cao et ...M2 ...
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