Proteomic data
The effect of using an inappropriate protein database for proteomic data analysis.
... used proteomic analysis to identify peptides purportedly of Iridovirus and Nosema origin; however the validity of this finding is ...this data that many of the spectra identified by Bromenshenk et ...
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Knowledge-based variable selection for learning rules from proteomic data
... The journal publishes original peer-reviewed research articles in all aspects of computational methods used in the analysis and annotation of sequences and structures, as well as all oth[r] ...
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Proteomic data show an increase in autoantibodies and alpha-fetoprotein and a decrease in apolipoprotein A-II with time in sera from senescence-accelerated mice
... Despite these limitations, our study still showed that the expression levels of some serum proteins, especially the autoantibodies, were significantly different between SAMP8 and SAMR1 mice from 2 months of age onwards. ...
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Proteomic analysis of urine exosomes reveals renal tubule response to leptospiral colonization in experimentally infected rats.
... specifically in the context of Leptospira infection. Nevertheless, relevant to our current findings, a role for the upregulation of APN expression and activity in the membrane is conceivable, and the following features / ...
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Proteomic properties reveal phyloecological clusters of Archaea.
... generated proteomic feature subsets with the intent to classify organisms based on their ...which proteomic features distinguish thermophiles from ...distinguish proteomic data according to ...
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A metaproteomic approach to study human-microbial ecosystems at the mucosal luminal interface.
... Shotgun proteomics demonstrated that mucosal lavage recov- ered a diversity of both host and microbial proteins. With respect to the host, the predominance of identified MLI proteins were involved in binding and ...
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Plasma proteomic profiling in HIV-1 infected methamphetamine abusers.
... and proteomic data into one, synthesizing within a comprehensive and biologically meaningful scheme ...and proteomic data from cellular proteins are ...
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Comparative analysis of genomics and proteomics in Bacillus thuringiensis 4.0718.
... and proteomic approach would enhance our ability to identify such substances, and particularily using mass spectrometry-based proteomic ...and proteomic data have showed that not all of the ...
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Unique proteomic signatures distinguish macrophages and dendritic cells.
... Our proteomic analyses, together with functional analyses of macrophages and DCs by many investigators [1–3,7], depict a scenario in which M-CSF and GM-CSF support highly polarized protein expression patterns that ...
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MaxReport: An Enhanced Proteomic Result Reporting Tool for MaxQuant.
... large-scale proteomic data based on tandem mass spectrometry (MS/MS) ...various proteomic studies including peptide identification, modification assignment, isotope labelling quantification and ...
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Rev. Assoc. Med. Bras. vol.58 número3 en v58n3a19
... relevant data for proteomic analysis, mainly in diseases afecting speciic tissues and organs, no question remains that serum and plasma are much more ...
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Proteomic analysis of apoplastic fluid of Coffea arabica leaves highlights novel biomarkers for resistance against Hemileia vastatrix
... A proteomic analysis of the apoplastic fluid (APF) of coffee leaves was conducted to investigate the cellular processes associated with incompatible (resistant) and compatible (susceptible) Coffea arabica-Hemileia ...
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Identification of Newly Synthesized Proteins by Echinococcus granulosus Protoscoleces upon Induction of Strobilation.
... This dual developmental capacity of the parasite and its requirement for more than one host to complete its life cycle are associated with its ability to readily respond to host environ- mental changes and regulate its ...
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Anil Kumar Ghosh, Marcelo Jacobs-Lorena
... Streptococcus pneumoniae enolase is important for plasminogen binding despite low abun- dance of enolase protein on the bacterial cell surface. Genetic and proteomic evidences support [r] ...
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Proteomic analysis reveals that proteasome subunit beta 6 is involved in hypoxia-induced pulmonary vascular remodeling in rats.
... UPS is one of the major cellular regulatory mechanisms involved in control of protein quality, the cell cycle, transcriptional factor regulation, gene expression, and cell differentiation [3,26]. With its crucial role in ...
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Functional complexity of the axonal growth cone: a proteomic analysis.
... The growth cone, the tip of the emerging neurite, plays a crucial role in establishing the wiring of the developing nervous system. We performed an extensive proteomic analysis of axonal growth cones isolated from ...
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Quantitative proteomic analysis of serum from pregnant women carrying a fetus with conotruncal heart defect using isobaric tags for relative and absolute quantitation (iTRAQ) labeling.
... Figure 1 displays the division of the analytical data set. 12 fetuses were diagnosed with isolated CTD, 15 fetuses with isolated ACHD and 7 with multi-malformation by ultrasound examination at 20-24 weeks of ...
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Proteomic study related to vascular connections in watermelon scions grafted onto bottle-gourd rootstock under different light intensities.
... Five proteins closely related to amino acid biosynthesis (see Tables 1 and 2, biological function) were identified by the proteomic analysis. The up-regulation of these proteins, particularly under 100 μmol m -2 s ...
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Ribosomal internal transcribed spacer of Prototheca wickerhamii has characteristic structure useful for identification and genotyping.
... For definitive identification of FL11-0001, we determined the nucleotide sequence of its LSU D1/D2. When the PCR- amplified DNA was directly used as a template, the data contained a considerable amount of ...
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Calpain3 is expressed in a proteolitically active form in papillomavirus-associated urothelial tumors of the urinary bladder in cattle.
... the proteomic profiles of the other complexes from the same samples, immunoprecipi- tated with antibodies, vs proteins known to play a role in BPV-2 infection, such as PDGF receptor beta ...
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