[PDF] Top 20 ANOVA-like differential expression (ALDEx) analysis for mixed population RNA-Seq.
Has 10000 "ANOVA-like differential expression (ALDEx) analysis for mixed population RNA-Seq." found on our website. Below are the top 20 most common "ANOVA-like differential expression (ALDEx) analysis for mixed population RNA-Seq.".
ANOVA-like differential expression (ALDEx) analysis for mixed population RNA-Seq.
... four RNA-Seq analysis methods and the microarray analysis of acid response and found that all four methods were able to identify equivalent numbers of the 423 genes that responded to ... See full document
15
High-resolution transcriptome of human macrophages.
... if RNA-seq would also enhance the un- derstanding of biological principles of macrophage polarization we applied network analysis based on a priori information assessing the information content of ... See full document
16
Simultaneous RNA-seq analysis of a mixed transcriptome of rice and blast fungus interaction.
... gene expression profiles for both the host plant and its fungal pathogen simultaneously, we developed a workflow to analyze the mixed transcriptome of rice and blast fungus that was obtained from infected ... See full document
15
Genome-wide analysis reveals the unique stem cell identity of human amniocytes.
... genome-wide analysis reveals that second trimester amniocytes already express many of these same germ layer specific markers at robust levels, and do not require any additional manipulation in order to activate ... See full document
16
Carbon Monoxide Releasing Molecule-A1 (CORM-A1) Improves Neurogenesis: Increase of Neuronal Differentiation Yield by Preventing Cell Death
... the expression of specific neuronal genes: Nestin, Tuj1 and ...the expression of RA ...ki67 expression and also prevented cell death, which was fol- lowed by increased Bcl-2 expression, ... See full document
24
Microbial contamination in next generation sequencing: implications for sequence-based analysis of clinical samples.
... from RNA samples that were polyA selected, a process that selects against most bacterial transcripts (which are typically poorly polyadenylat- ed) ...ribosomal RNA reads for each sample, and we found little ... See full document
6
RNA-seq analysis of the Quercus suber root response to drought
... the expression of functional downstream response genes, involved in growth regulation, water management, ROS scavenging and induction secondary metabolism (Wang et ... See full document
134
R-seqQI: RNA-Seq Quality Indicator
... in RNA-Seq of non-model ...objective, RNA-Seq data from nine model organisms (Arabidopsis thaliana, Aspergillus nidulans, Caenorhabditis elegans, Drosophila melanogaster, Homo sapiens, Mus ... See full document
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UNIVERSIDADE FEDERAL DE UBERLÂNDIA FACULDADE DE MEDICINA PROGRAMA DE PÓS-GRADUAÇÃO EM CIÊNCIAS DA SAÚDE LUIZ CARLOS DE OLIVEIRA JÚNIOR
... O Fator neurotrófico derivado do cérebro (BDNF), uma das mais importantes neurotrofinas, tem sido relacionada tanto com o desenvolvimento como com a melhora da depressão (GROVES, 2007). Em modelos animais o estresse de ... See full document
73
Comparative analysis of human protein-coding and noncoding RNAs between brain and 10 mixed cell lines by RNA-Seq.
... gene expression usually exhibit temporal and spatial ...stages. RNA-Seq provides tremendous opportunities to reveal these diversities and the peculiar specificities of the human transcriptome ... See full document
8
RNA-Seq analysis of the Sclerotinia homoeocarpa--creeping bentgrass pathosystem.
... CA). RNA was extracted from fungus grown on PDA, noninoculated grass, and infected grass according to the previously described ...methods. RNA was extracted using Trizol (Invitrogen, Carlsbad, CA) and ... See full document
13
RNA CoMPASS: a dual approach for pathogen and host transcriptome analysis of RNA-seq datasets.
... the analysis of small and large RNA sequencing studies through an automated dataflow management and acceleration of processing via distributed computing over a cluster (Figure ...of RNA CoMPASS is to ... See full document
9
Integration of developmental and environmental signals via a polyadenylation factor in Arabidopsis.
... Genome-wide expression analysis in the wt and oxt6 mutant The numerous phenotypes seen in the oxt6 mutant suggest a widespread effect on gene ...with RNA isolated from wt and oxt6 leaves confirmed ... See full document
23
SuperSAGE digital expression analysis of differential growth rate in a European sea bass population
... STRING analysis revealed a high representation of transcripts for ri- bosomal proteins and transcription factors in all tissues, which was perhaps unsurprisingly taking into consideration the abundance and ... See full document
10
Interaction of Arabidopsis Trihelix-Domain Transcription Factors VFP3 and VFP5 with Agrobacterium Virulence Protein VirF.
... Sequence analysis of the full-length VFP3 cDNA predicted a single open reading frame (ORF) encoding a protein of 249 amino acid residues with a relative molecular mass of ... See full document
23
RNA-Seq gene profiling--a systematic empirical comparison.
... simulated RNA-seq from a single species (Human) it is possible that the pipelines evaluated may behave differently on data from evolutionary distant ...for RNA-seq data ... See full document
10
Mining RNA-seq data for infections and contaminations.
... of expression other than the host cell and are little equipped to address the problems arising from redundancies and gaps among sequenced microbe and virus ...mining RNA–seq experiments for ... See full document
12
Transcriptome analysis of chlorantraniliprole resistance development in the diamondback moth Plutella xylostella.
... particular analysis, we discovered that in GXA populations, most of the metabolic detoxification enzyme genes were slightly up-regulated and, in the LZA populations, were significantly ...resistance ... See full document
13
Caracterização e análise da expressão de microRNAs-like de Paracoccidioides brasiliensis
... the expression of genes and proteins in those pathogens are not fully ...libraries. Differential expression data revealed a similar profile of regulated microRNAs-like between the mycelial and ... See full document
231
Analysis of RNA-seq data from the interaction of Coffea spp. - Colletotrichum kahawae
... Coffee is one of the most valuable agricultural products in the world, and one of the greatest economic income generators for several developing countries where a considerable percentage of the population depends ... See full document
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