[PDF] Top 20 Evolution, interactions, and biological networks.
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Evolution, interactions, and biological networks.
... of networks has expanded rapidly over the last 10 years; networks are now widely recognized not only as outcomes of complex interactions, but as key determinants of structure, function, and ... See full document
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Climate-vegetation-soil interactions and long-term hydrologic partitioning: signatures of catchment co-evolution
... properties and catchment ...mate and catchment properties (more specifically the catch- ment’s geomorphology, soils, topography and ...climates and at differ- ent temporal ...drivers ... See full document
9
Characterizing user navigation and interactions in online social networks
... in-degree and out-degree are close to each other and social interaction through the guestbook is highly ...traces and showed that they ex- hibit significantly lower levels of the ‘‘small-world’’ ... See full document
24
Quím. Nova vol.21 número4
... field interactions of different ...Pascova and Gutzow and similar dependencies obtained ...simplicity and straightforward ...size and the number of clusters in the ...the ... See full document
5
Evolution of networks for body plan patterning; interplay of modularity, robustness and evolvability.
... 3) and that these differences are significant (Table ...network and resulting developmental dynamics for a final fit individual evolved in an example SS (A) or a SF (B) type evolutionary ...population, ... See full document
16
Labour mobility, industry evolution and social networks: a co-evolutionary model
... the evolution of consulting industries (Gallouj, 2002; Mamede, 2002) which show that the growth of firms is very much affected by their capacity to recruit new specialists and to avoid poaching by ... See full document
47
Host-pathogen interactions: a biological rendez-vous of the infectious nonself and danger models?
... alternative and comprehensive view of the immune system, where endogenous danger signals ...anti-infectious and antitumor immunity, autoimmunity, or allograft ...innate and adaptive responses ...did ... See full document
5
Tandem Domains with Tuned Interactions Are a Powerful Biological Design Principle.
... that evolution has come up with an elegant solution: the engineered RIα homologous tandem cAMP binding domains (CBD-A, CBD-B) ...weak interactions between the ...Melacini and his colleagues show [5], ... See full document
6
Generation of diverse biological forms through combinatorial interactions between tissue polarity and growth.
... develop and apply a polarity-based system which we call the Growing Polarised Tissue (GPT) ...tissue and is anchored in regions termed tissue polarity organisers that are also under genetic ...arrangements ... See full document
22
Modelling and Simulation of Biological Regulatory Networks by Stochastic Petri Nets
... – Biological Regulatory Networks (BRNs) depicts the basic interactions in between various nodes in all biological ...chemical and biological actions are governed by continuous ... See full document
6
Chronobiomics: The Biological Clock as a New Principle in Host-Microbial Interactions.
... eukaryotic and prokaryotic part of the “metaorganism”to the time of day might have been an important selective feature during evo- ...that biological clock systems are at work in a large range of bio- ... See full document
5
The emergence and early evolution of biological carbon-fixation.
... reticulated networks of single-gene histories ...the evolution of carbon-fixation, complete pathway reconstructions, combined with characterization of reaction mechanisms and enzymes, often suggests ... See full document
16
Beyond element-wise interactions: identifying complex interactions in biological processes.
... Background: Biological processes typically involve the interactions of a number of elements (genes, cells) acting on each ...as networks whose nodes are the elements in question and edges ... See full document
14
Network motif identification and structure detection with exponential random graph models
... regulatory networks of E. coli. The regulatory networks were obtained from the RegulonDB database (Release ...Saul and Filkov (2007) principles of implementation of ERGMs to the transcription ... See full document
15
Network inference : extension of linear programming model for time-series data
... package and defined the following settings: popula- tion size 500, maximum number of iterations 1000, crossover rate ...the networks are considered as ...of networks that explain the data ...result ... See full document
124
Dominating biological networks.
... hepatitis, and influenza), exhibit some ‘‘topological centrality’’ compared to the rest of the proteins in the PPI network ...essentiality and its degree centrality (the larger the degree of a node, the ... See full document
12
Angiogenin enhances cell migration by regulating stress fiber assembly and focal adhesion dynamics.
... cells and human umbilical vein endothelial cells (HUVECs) [5,7–9,19,20], possibly through an endocytosis pathway ...2) and ANG- treated (ANG+) groups (considered to be non-specifically trapped by the ... See full document
10
Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans.
... data and the ...polarized and unpolarized analyses, we took the conservative approach of retaining for analysis only codons for which there were no more than two alternative ...row and column in the ... See full document
26
What’s in it for me? Enlightening motivation within a social network decision-making
... sense-making and problem solving, where people know each other and work together, communicate, and coordinate with each other ...contrast, networks of practice consist of a larger, ... See full document
6
A software for parameter optimization with Differential Evolution Entirely Parallel method
... CPUs and employs the pool of worker threads with asynchronous queue of tasks to evaluate the individual solutions in ...queue and starts as soon as there is an available thread in the ... See full document
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