[PDF] Top 20 Facilitating functional annotation of chicken microarray data
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Facilitating functional annotation of chicken microarray data
... aspects of computational methods used in the analysis and annotation of sequences and structures, as well as all other areas of computational ... See full document
1
Testing the ortholog conjecture with comparative functional genomic data from mammals.
... pace of whole-genome sequencing coupled with the rapid—but relatively slower—pace of functional geno- mics projects has required commensurately fast methods for computational annotation ... See full document
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Functional annotation of rheumatoid arthritis and osteoarthritis associated genes by integrative genome-wide gene expression profiling analysis.
... comparisons of gene expression of RA and OA was performed by Ungethuem et ...total of 11 microarray mRNA profiling studies comparing RA and OA with control tissue have been ...comparison ... See full document
9
Comparison and consolidation of microarray data sets of human tissue expression
... gene annotation by Gene Ontology to assign tissue types to biological ...enrichment of tissue-specific genes based with a PEM > ...profiles of biological processes to the given tissue ...selection ... See full document
17
Functional annotation of hierarchical modularity.
... reconstruction of a hierarchical structure of a functional module M defined by its gene set ...hierarchical functional modularity from such a ‘‘bag of ...presence of ... See full document
14
A Classification of Microarray Gene Expression Data Using Hybrid Soft Computing Approach
... properties of one feature selection approach that was proposed in their previous work, which was the simplification of the feature selection technique based on the depended amount of attribute in ... See full document
10
Density based pruning for identification of differentially expressed genes from microarray data
... Director of ASCI); ...(Director of the Institute for Informatics, University of Amsterdam, The Netherlands and Editor-in-Chief, Future Generation Computer Systems, Elsevier); ...Institute of ... See full document
14
Parallelization of multicategory support vector machines (PMC-SVM) for classifying microarray data
... consists of 27 peer-reviewed papers selected from IMSCCS Symposium of Computational Biology and Bioinformatics (SCBB) held in Zhejiang University, Hangzhou, China on June 21-22, ...biological data ... See full document
2
Co-Design of a Computer-Assisted Medical Decision Support System to Manage Antibiotic Prescription in an ICU Ward
... HAITool is a web-based information system supported by a SQL Server (2012) database which combines and stores pharmacy, microbiology, and patient-related information (Fig. 1). The current Extract-Transformation-Load ... See full document
5
Functional interactome of Aquaporin 1 sub-family reveals new physiological functions in Arabidopsis Thaliana
... membranes of different cellular compartments, facilitate the water flux, solutes and gases across the cellular plasma ...the functional interactome of it ...transport of water, diffusion ... See full document
10
Analysis and functional annotation of an expressed sequence tag collection for tropical crop sugarcane
... polymorphism data in modern sugar- cane cultivars obtained using molecular markers (Grivet et ...SUCEST data set may at least partially be due to contrasted ...number of SNPs detected in an SAS and ... See full document
12
Discovery and functional annotation of SIX6 variants in primary open-angle glaucoma.
... Members of NEIGHBORHOOD Consortium Investigators: Allingham, ...(Department of Ophthalmology, Duke University School of Medicine); Brilliant, Murray (Center for Human Genetics, Marshfield Clinic); ... See full document
10
Application of a novel functional gene microarray to probe the functional ecology of ammonia oxidation in nitrifying activated sludge.
... configuration of engineered BNR systems makes controlling process performance difficult and for plants with combined nitrification–denitrification, failure to maintain stable nitrification performance is a ... See full document
11
Novel R pipeline for analyzing Biolog Phenotypic MicroArray data.
... replicates of the same experimental conditions may be incomparable, ...kinds of artefacts typically affect all the measurements on a plate by consistently decreasing or increasing the metabolic ...outcome ... See full document
14
Approaching the functional annotation of fungal virulence factors using cross-species genetic interaction profiling.
... impact of Liv6 on vacuole ...number of vacuoles than wild-type cells ...any of the bait genes did not exhibit a change in vacuole number (Figure ... See full document
17
Probiotic technological and functional characteristics of Lactobacillus strains isolated from chicken gut
... tract of monoassociated mice and improved the phagocytic capacity of peritoneal macrophages in these ...for chicken, from which it was ...viability of Lactobacillus species in a W/O emulsion ... See full document
8
Characterization of Liaoning cashmere goat transcriptome: sequencing, de novo assembly, functional annotation and comparative analysis.
... consist of repeated core sequences of 2-6 base pairs in ...unigenes. Of the 117,854 unigenes obtained from 454 sequencing, 2,621 unigenes were identified to contain 2,781 SSRs, 122 of the ... See full document
11
Integrated analysis of microarray data of atherosclerotic plaques: modulation of the ubiquitin-proteasome system.
... theories of the pathogenesis of atherosclerosis have been proposed, so far none of these theories can explain all the features of atherosclerosis ...complexity of atherosclerosis ... See full document
10
Taxonomic precision of different hypervariable regions of 16S rRNA gene and annotation methods for functional bacterial groups in biological wastewater treatment.
... profiling of the functional groups is more useful than enumerating the entire bacterial ...those functional bacterial groups with high throughput sequencing may be served as routine analysis ... See full document
11
Comparison of muscle transcriptome between pigs with divergent meat quality phenotypes identifies genes related to muscle metabolism and structure.
... trimmed of external fat, kept at 4 uC for 3 subsequent days, and ...determination of shear force on cooked meat using a Warner-Bratzler cell fitted on a universal testing machine (Instron France ...piece ... See full document
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