[PDF] Top 20 A relative variation-based method to unraveling gene regulatory networks.
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A relative variation-based method to unraveling gene regulatory networks.
... Gene regulatory network (GRN) reconstruction is essential in understanding the functioning and pathology of a biological ...developed to unravel a GRN. The DREAM project aims to clarify both ... See full document
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A plasmid-based Escherichia coli gene expression system with cell-to-cell variation below the extrinsic noise limit
... [29] to generate plasmids pZH510, pZH511, pZH512 and pZH513 (Table A in S1 ...Simulated gene expression dose-response and noise in different regulatory ...the regulatory schemes explored by ... See full document
15
Inference of gene regulatory networks with sparse structural equation models exploiting genetic perturbations.
... with gene expression data for inference of gene networks not only improves inference accuracy, but also enables learning of causal regulatory relations among ...framework to integrate ... See full document
13
Automated Identification of Core Regulatory Genes in Human Gene Regulatory Networks.
... analysis based on an incomplete network is prone to ...a gene does not necessarily translate to a functional interaction between the TF and the target ...criteria to be fulfilled such ... See full document
28
Toward a systems-level understanding of gene regulatory, protein interaction, and metabolic networks in cyanobacteria
... 2006). To validate their predictions, and to incorporate specific data for Synechococcus ...extended regulatory network, consti- tuting 429 genes, of which 338 were differentially expressed in the ... See full document
18
Dissecting the genetic architecture of host-pathogen specificity.
... necessary to account for the specific component of the ...of gene–gene and gene–environment interactions ...need to include different combinations of host and pathogen genotypes in the ... See full document
3
Influence of the experimental design of gene expression studies on the inference of gene regulatory networks: environmental factors
... observational gene expression data: normal environmental condition, (II) interventional gene expression data: growth in rich media, (III) interventional gene expression data: normal environmental ... See full document
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Construction and analysis of the protein-protein interaction networks based on gene expression profiles of Parkinson's disease.
... taken to construct the PPI ...used to construct a Query-Query PPI (QQPPI) network, ...[17] to create another QQPPI network. The two networks constructed by Genes2FANs and POINeT were ... See full document
17
Cost Analysis of Algorithm Based Billboard Manger Based Handover Method in LEO satellite Networks
... wireless networks. But the handover occurrence is more due to the speed of the ...Algorithm based Billboard Manager Based Handover method ... See full document
7
A cluster method for finding node sets / sub-networks based on between- node similarity in sets of adjacency nodes: with application in finding sub-networks in tumor pathways
... i.e., a=a’. Generally the nodes in a node set, with similar sets of adjacency nodes, have some of the similar properties. A sub-network is a node set, and connections within the sub-network are much more than connections ... See full document
11
A versatile method to design stem-loop primer-based quantitative PCR assays for detecting small regulatory RNA molecules.
... Total RNA was isolated from ES cells and mouse organs using Trizol Reagent (Life Technologies/Invitrogen) according to the instructions. Total RNA was extracted from virus infected plants displaying symptomatic ... See full document
10
High-efficiency phenotyping for vitamin A in banana using artificial neural networks and colorimetric data
... used to train the network and 30%, for validation (18 ...(MLP) networks were used for the analysis and developed using the “mlp” function of the RSNNS package with back propagation algorithm and learning ... See full document
7
A benchmark-based method to derive metric thresholds
... We selected 47 SPLs from repositories, such as SPL2go [SPL2GO, 2015] and FeatureIDE examples [FeatureIDE, 2015], and 17 SPLs from research papers; summing up to 64 SPLs in total. In order to have access ... See full document
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Genome-wide identification of regulatory elements and reconstruction of gene regulatory networks of the green alga Chlamydomonas reinhardtii under carbon deprivation.
... putative regulatory elements of ...200 to 400 bp were used for the construction of a DNA library for ...according to the user guide instructions (Illumina, Eindhoven, The ...subjected to ... See full document
16
An Efficient Method for Assessing Water Quality Based on Bayesian Belief Networks
... developed to analyse existing water quality monitoring ...monitoring to represent the methodology’s ...is to develop a predictive model and a computer system to assess and predict the impact ... See full document
12
Hypermethylation of FOXP3 Promoter and Premature Aging of the Immune System in Female Patients with Panic Disorder?
... due to compensatory proliferative mechanisms in the periphery and increased Th1 and Th17 responses in relation to a dysfunctional Treg ...in gene regulation due to internal and exter- nal ... See full document
14
Analysis and Comparative Study of Clock Synchronization Schemes in Wireless Sensor Networks
... broadcast to a set of client nodes in the one- hop neighborhood of a beacon ...regression to compute relative offsets and rate differences to each ...reading to the local timescale of ... See full document
6
Lat. Am. j. solids struct. vol.13 número14
... due to their high dynamic bending resistance and energy-absorbing effectiveness, foam-filled double circular tube structures have been recommended as crashworthy structures (Li et ...techniques to a ... See full document
21
Book Review: Canadian Islamic Schools: Unraveling the Politics of Faith, Gender, Knowledge, and Identity
... admits to the difficulties of interrogating the internal dynamics of power and authority that exist within her ethnographic ...are based largely around a critical faith-centered epistemology, informed by an ... See full document
3
Watchdog-LEACH: A new method based on LEACH protocol to Secure Clustered Wireless Sensor Networks
... vulnerable to attacks [13, 14]. Besides the well- known vulnerabilities due to wireless communication and ad hoc, WSNs face additional problems, including sensor nodes being small, cheap devices that are ... See full document
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