Tandem Repeat
Monoclonal antibodies recognizing the non-tandem repeat regions of the human mucin MUC4 in pancreatic cancer.
... in vitro and in vivo conditions. Our recent studies have demonstrated that MUC4 contributes to the chemoresistance in pancreatic cancer cells by activating anti-apoptotic pathways and promoting cell survival [15]. Hence ...
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A novel multilocus variable number tandem repeat analysis typing scheme for African phylotype III strains of the Ralstonia solanacearum species complex
... number tandem repeat analysis (MLVA) is an alternative genotyping method that targets tandem repeats (TRs), which are some of the most polymorphic loci found in genomes (Van Belkum et ...the ...
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Mucin variable number tandem repeat polymorphisms and severity of cystic fibrosis lung disease: significant association with MUC5AC.
... Variability in cystic fibrosis (CF) lung disease is partially due to non-CFTR genetic modifiers. Mucin genes are very polymorphic, and mucins play a key role in the pathogenesis of CF lung disease; therefore, mucin genes ...
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Tandem repeat distribution of gene transcripts in three plant families
... The occurrence of micro and minisatellites in rice se- quences (11.28%) is higher than in other species, ranging from 2.5 to 5 times more sequences containing these repeti- tive DNA loci. The fact that species having ...
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Short-tandem repeat analysis in seven Chinese regional populations
... Short tandem repeat (STR) loci are highly polymorphic loci in the human genome, are relatively small in size, and can be analyzed in a multiplex PCR ...
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Molecular typing of Argentinian Mycobacterium avium subsp. paratuberculosis isolates by multiple-locus variable number-tandem repeat analysis
... were not found on the same continent (Moreira et al., 1999). Molecular typing based on MIRU (Mycobacterial interspersed repetitive unit) and VNTR (variable number in tandem repeat) loci has been employed as ...
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Development and validation of a single-tube multiple-locus variable number tandem repeat analysis for Klebsiella pneumoniae.
... number tandem repeat analysis (MLVA) using a single-tube fluorescently primed multiplex PCR for 8 Variable Number Tandem Repeats (VNTRs) and automated fragment size ...
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An ultra-high discrimination Y chromosome short tandem repeat multiplex DNA typing system.
... short tandem repeat markers (Y-STRs) are often used to identify a male donor DNA profile in the presence of excess quantities of female DNA, such as is found in many sexual assault ...
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Spoligotyping and variable number tandem repeat analysis of Mycobacterium bovis isolates from cattle in Brazil
... Many reports on the MIRU-VNTR genotyping of M. bovis isolates tested other sets of tandem repeat loci, such as the ETRs (ETR A-F) (Frothingham & Meeker- O’Connell 1998) or the Queen’s University Belfast ...
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Specific multilocus variable-number tandem-repeat analysis genotypes of Mycoplasma pneumoniae are associated with diseases severity and macrolide susceptibility.
... Clinical relevance of multilocus variable-number tandem-repeat (VNTR) analysis (MLVA) in patients with community- acquired pneumonia (CAP) by Mycoplasma pneumoniae (M. pneumoniae) is unknown. A ...
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Multi-locus variable-number tandem repeat profiling of Salmonella enterica serovar Typhi isolates from blood cultures and gallbladder specimens from Makassar, South-Sulawesi, Indonesia.
... Typhoid fever is a major disease problem in Indonesia and is endemic in most if not all major islands of the archipelago [1]. The causative agent of typhoid fever is Salmonella enterica serovar Typhi, a rod shaped, ...
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Mass spectrometric analysis of Ehrlichia chaffeensis tandem repeat proteins reveals evidence of phosphorylation and absence of glycosylation.
... Human monocytotropic ehrlichiosis (HME) is an emerging life-threatening tick-borne zoonosis caused by the obligately intracellular Gram-negative bacterium Ehrlichia chaffeensis. E. chaffeensis exhibits tropism for ...
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5meCpG epigenetic marks neighboring a primate-conserved core promoter short tandem repeat indicate X-chromosome inactivation.
... trinucleotide tandem CAG repeat (microsatellite, short tandem repeat - STR) in exon 1 of the human androgen receptor (AR) gene (MIM 313700) in the Xq12 region, known as the HUMARA assay, is a ...
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Genome wide characterization of short tandem repeat markers in sweet orange (Citrus sinensis).
... In the first step, we analyzed the distribution and frequency of perfect microsatellites with a minimum length of 16-bp and a unit size of 1 to 10-bp. The results are summarized in Table 1. A total of 50,846 SSRs were ...
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Frequência alélica de sete marcadores Short Tandem Repeat em indivíduos do estado do Rio Grande do Sul, Brasil
... Test es de pat ernidade cham ados 'casos atípicos', em que o supost o pai é falecido e não se dispõe de parent es suficient es para a reconst rução do genót ipo do m esm o, ou nos cas[r] ...
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Widespread nasal carriage of Mycobacterium leprae among a healthy population in a hyperendemic region of northeastern Brazil
... 2: agarose gel analysis of 91 bp DNA product (black arrows) for the rpoT region of Mycobacterium leprae by variable number tandem repeat polymerase chain reaction in nasal samples from [r] ...
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Structural of two isolectins from the marine red alga Solieria filiformis (Kützing) P.W. Gabrielson and their anticancer effect on MCF7 breast cancer cells
... As described in the literature, Solieria filiformis lectin (SfL) from the marine red alga S. filiformis was found to have antinociceptive and anti-inflammatory effects. In this study, we characterized two SfL variants, ...
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Analysis of 31 STR loci in the genetic isolate of Carloforte (Sardinia, Italy)
... short tandem repeat loci in the population of Carloforte were analyzed, these repre- senting a linguistic and genetic isolate located on the island of Sardinia ...short tandem repeat loci ...
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Ana Angélica Leal Barbosa
... The mean frequencies found for each locus in the an- cestral populations (Table 1) were used to estimate the eth- nic admixture by the genic identity method, initially using a trihybrid model for both the Jequié and ...
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Genetic diversity of Ehrlichia canis strains from naturally infected dogs in Rio de Janeiro, Brazil
... In Brazil, two genogroups based on the amino acid sequences of the tandem repeat region are circulating and they have different patterns: the Brazilian genogroup (ASVVPEAE) and the US genogroup (TEDSVSAPA). ...
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