[PDF] Top 20 Genome-wide analysis of single nucleotide polymorphisms uncovers population structure in Northern Europe.
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Genome-wide analysis of single nucleotide polymorphisms uncovers population structure in Northern Europe.
... informativeness of the presented dimensions was assessed by calculating the proportion of their respective eigenvalues to the sum of absolute ...Distributions of IBS in sample pairs ... See full document
9
Genome Wide Association Analysis Reveals New Production Trait Genes in a Male Duroc Population.
... panel of 39,436 single nucleotide polymorphisms. In total, we detected 11 genome-wide and 162 chromosome-wide single nucleotide polymorphism trait ... See full document
15
Genetics of VEGF serum variation in human isolated populations of cilento: importance of VEGF polymorphisms.
... player in angiogenesis. Because of its crucial role in this process, the study of the genetic factors controlling VEGF variability may be of particular interest for many ... See full document
10
Population structure of Neisseria gonorrhoeae based on whole genome data and its relationship with antibiotic resistance
... also single representatives from other countries, including Japan, Pakistan, Australia, Austria, Philippines, Norway and Sweden using the WGS approach to a high average coverage (average 225-fold read ...set ... See full document
23
Comparison of single nucleotide polymorphisms and microsatellites in non-invasive genetic monitoring of a wolf population
... detected in the se- quences are in speciic positions suitable for primer and probe ...design. In fact, some requirements are ...example, in our study, out of 27 polymorphisms ... See full document
16
Association study of genetic variants at single nucleotide polymorphism rs109231409 of mannose-binding lectins 1 gene with mastitis susceptibility in Vrindavani crossbred cattle
... Development of animals tolerant to mastitis is always sought after by researchers owing to the economic importance of the ...Lack of phenotypic data on clinical mastitis underscores breeding ... See full document
4
Genomics meets glycomics-the first GWAS study of human N-Glycome identifies HNF1α as a master regulator of plasma protein fucosylation.
... wavelengths of 330 and 420 nm, ...regulator of fucose synthesis pathway ...(RNAi) in HepG2 ...(RNAi) in HepG2 ...performed in triplicate. C). Chromatin immunoprecipitation (ChIP) ... See full document
14
Single nucleotide polymorphisms of PIN1 promoter region and cancer risk: evidence from a meta-analysis.
... efficacy of meta-analysis [27,28]. In this meta-analysis, we included 4619 cancer cases and 4661 controls, which can provide enough statistical ...limitations of this study should be ... See full document
9
WNT signaling pathway gene polymorphisms and risk of hepatic fibrosis and inflammation in HCV-infected patients.
... measure of hepatic pathology, and had anthropometric measurements ...cross-sectional analysis to: 1) Caucasian and African American male veterans aged 18-70 years (who collectively represent 90%+ of ... See full document
9
Single nucleotide polymorphisms of Toll-like receptor 4 decrease the risk of development of hepatocellular carcinoma.
... expression of such proteins could play a role in neoplastic transformation ...[26]. In our study, the TLR4 SNPs may potentially exert regulator effects and therefore might decrease the risk for ... See full document
7
Association of single nucleotide polymorphisms of IL23R and IL17 with ulcerative colitis risk in a Chinese Han population.
... susceptibility in a Finnish population, while another study revealed that an association of IL23R with UC, but not with CD in Swedish patients ...susceptibility of CD but not of ... See full document
7
Genomic prediction of biological shape: elliptic Fourier analysis and kernel partial least squares (PLS) regression applied to grain shape prediction in rice (Oryza sativa L.).
... quantity of agricultural ...target in plant breeding [2]. For example, in cereal crop plants, grain shape is an important trait that is related to the intended end-usage, consumer’s preference [3], ... See full document
17
Genetic association of single nucleotide polymorphisms in dystrobrevin binding protein 1 gene with schizophrenia in a Malaysian population
... consisted of 171 cases. The subjects were of mixed ...gender of the schizophrenia patients and control group are shown in Ta- ble ...composed of in-patients recruited from the ... See full document
9
Genome wide association analysis of a founder population identified TAF3 as a gene for MCHC in humans.
... 5–10% of the total observed variance is explained by the genetic loci found to date, suggesting that additional loci should be searched using approaches alternative to large meta ...(Genome Wide ... See full document
8
A genome-wide analysis of FRT-like sequences in the human genome.
... location in LINE1 (Figure 6A), on average, FRT-like sequences are more rare in repeated genomic DNA than in unique DNA: repetitive DNA constitutes about 50% of the human genome but only ... See full document
11
Single Nucleotide Polymorphism Analysis of Protamine Genes in Infertile Men
... conserved in all vertebrates ...fied in human and ...precursors of 66-101 residues (4, 13, 14). Humans have one copy of the PRM1 and PRM2 gene per haploid genome, located on chro- ... See full document
6
Arq Bras Endocrinol Metab vol.57 número8
... procedure. Single nucleotide polymorphisms (SNPs) in the ive candidate genes were selected based on previous association data in adults, minor allele frequency of at least 5% ... See full document
9
DNA suspension arrays: silencing discrete artifacts for high-sensitivity applications.
... limits of array-based SNP analysis was demon- strated by a recent study using a similar method (without artifact silencing) and rigorous background modeling to account for template-dependent background ... See full document
9
Evaluation of candidate nephropathy susceptibility genes in a genome-wide association study of African American diabetic kidney disease.
... Component Analysis (PCA). To address the effect of admixture in this African American dataset we performed a Principal Components Analysis (PCA) using all GWAS SNPs that passed quality ... See full document
6
Identification of single nucleotide polymorphisms associated with hyperproduction of alpha-toxin in Staphylococcus aureus.
... regulation of hla expression, we created hla promoter-gfp-lux dual reporter constructs as previously described ...courtesy of Philip Hill [55]. An approximate 1 kb upstream region of hla was ... See full document
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